RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 RERGQ96A58 199 aaPredicted RBP25.92■■□□□ 1.74
HDAC3-201ENST00000305264 FAM149AA5PLN7 773 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 ANKDD1BA6NHY2 528 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 NDUFS4O43181 175 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TBX6O95947 436 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 KRT6AP02538 564 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 KRT6BP04259 564 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 EIF2S1P05198 315 aaKnown RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 SERPIND1P05546 499 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 MSL3P1P0C860 447 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 KRT6CP48668 564 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 COL9A2Q14055 689 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 DGLUCYQ7Z3D6 616 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 MARCH9Q86YJ5 346 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 CRLF3Q8IUI8 442 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 BMPERQ8N8U9 685 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TTLQ8NG68 377 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TWIST2Q8WVJ9 160 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 CCT6BQ92526 530 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 N4BP2L2Q92802 583 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 USP7Q93009 1102 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 ZNF501Q96CX3 271 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 THAP11Q96EK4 314 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 LIN37Q96GY3 246 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TUBB1Q9H4B7 451 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 STARD5Q9NSY2 213 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TSC22D4Q9Y3Q8 395 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 TMX2-CTNND1H3BSU7 103 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 EDF1O60869 148 aaKnown RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 ULK1O75385 1050 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 SKAP2O75563 359 aaPredicted RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 JUNP05412 331 aaKnown RBP25.91■■□□□ 1.74
HDAC3-201ENST00000305264 CCL4P13236 92 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 HKDC1Q2TB90 917 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 ASPGQ86U10 573 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 SLC13A3Q8WWT9 602 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 OR6C1Q96RD1 312 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 CMKLR1Q99788 373 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 PRM3Q9NNZ6 103 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 DMRT3Q9NQL9 472 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 LOXL2Q9Y4K0 774 aa25.91■■□□□ 1.74
HDAC3-201ENST00000305264 PMS2P1A4D2B8 440 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 MAGEB17A8MXT2 336 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 FOXM1Q08050 763 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 TMPRSS12Q86WS5 348 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 CSNK1A1LQ8N752 337 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 OR1L3Q8NH93 324 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 TM4SF19Q96DZ7 209 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 ZNF285Q96NJ3 590 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 SPTBN2O15020 2390 aa25.9■■□□□ 1.74
HDAC3-201ENST00000305264 A0A1W2PNU3 283 aaPredicted RBP25.89■■□□□ 1.74
HDAC3-201ENST00000305264 SH3BGRLO75368 114 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 PIK3CBP42338 1070 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 GNGT1P63211 74 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 ACY1Q03154 408 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 TARDBPQ13148 414 aaKnown RBP eCLIP25.89■■□□□ 1.74
HDAC3-201ENST00000305264 PDCD2Q16342 344 aaPredicted RBP25.89■■□□□ 1.74
HDAC3-201ENST00000305264 TRPV3Q8NET8 790 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 PIWIL2Q8TC59 973 aaKnown RBP25.89■■□□□ 1.74
HDAC3-201ENST00000305264 ZNF317Q96PQ6 595 aaPredicted RBP25.89■■□□□ 1.74
HDAC3-201ENST00000305264 FGFR1OP2Q9NVK5 253 aa25.89■■□□□ 1.74
HDAC3-201ENST00000305264 H3BMH7 237 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 SRPX2O60687 465 aaPredicted RBP25.89■■□□□ 1.73
HDAC3-201ENST00000305264 CLEC3AO75596 197 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 VIMP08670 466 aaKnown RBP25.89■■□□□ 1.73
HDAC3-201ENST00000305264 GSTM2P28161 218 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 LSP1P33241 339 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 RPS13P62277 151 aaKnown RBP25.89■■□□□ 1.73
HDAC3-201ENST00000305264 HYAL2Q12891 473 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 WASHC2DQ5SRD0 308 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 RAB11FIP2Q7L804 512 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 LRRC34Q8IZ02 419 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 AICDAQ9GZX7 198 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 SPRTNQ9H040 489 aaPredicted RBP25.89■■□□□ 1.73
HDAC3-201ENST00000305264 FANCEQ9HB96 536 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 APMAPQ9HDC9 416 aa25.89■■□□□ 1.73
HDAC3-201ENST00000305264 PIP5K1BO14986 540 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 ETHE1O95571 254 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 CHEK2O96017 543 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 ITIH1P19827 911 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 SERPINB1P30740 379 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 CHCHD4Q8N4Q1 142 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 SEC16BQ96JE7 1060 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 MS4A8Q9BY19 250 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 IRAK4Q9NWZ3 460 aa25.88■■□□□ 1.73
HDAC3-201ENST00000305264 AKAP7Q9P0M2 348 aaPredicted RBP25.88■■□□□ 1.73
HDAC3-201ENST00000305264 TGFB1P01137 390 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 SLC35G6P0C7Q6 338 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 SNRPNP63162 240 aaKnown RBP25.87■■□□□ 1.73
HDAC3-201ENST00000305264 C10orf62Q5T681 223 aaPredicted RBP25.87■■□□□ 1.73
HDAC3-201ENST00000305264 DDIASQ8IXT1 998 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 KCT2Q8NC54 265 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 ACPTQ9BZG2 426 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 ADGRE2Q9UHX3 823 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 RUVBL1Q9Y265 456 aaKnown RBP25.87■■□□□ 1.73
HDAC3-201ENST00000305264 CCDC187A0A096LP49 1063 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 FOXE1O00358 373 aaPredicted RBP25.87■■□□□ 1.73
HDAC3-201ENST00000305264 OR2B3O76000 313 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 HNRNPH1P31943 449 aaKnown RBP25.87■■□□□ 1.73
HDAC3-201ENST00000305264 PHEXP78562 749 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms