RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 USP39Q53GS9 565 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CACHD1Q5VU97 1274 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 AHSA2Q719I0 299 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CDH26Q8IXH8 852 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 NRTNQ99748 197 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 UGT2B28Q9BY64 529 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 SLC6A14Q9UN76 642 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 MAPRE3Q9UPY8 281 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 RFXAPO00287 272 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 STK16O75716 305 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CD6P30203 668 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 HOXC12P31275 282 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 SOX6P35712 828 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 RPS14P62263 151 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CCDC58Q4VC31 144 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 RUNDC3AQ59EK9 446 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 FAM209BQ5JX69 171 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 IER5LQ5T953 404 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 LRRC8DQ7L1W4 858 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 B3GNT8Q7Z7M8 397 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 EID3Q8N140 333 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 ELOVL6Q9H5J4 265 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 UCK1Q9HA47 277 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
KCNIP3-201ENST00000295225 A0A096LPI6 279 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 RFXANKO14593 260 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 NADKO95544 446 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 IGFBP5P24593 272 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 C21orf33P30042 268 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 B4GALNT1Q00973 533 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 SGCGQ13326 291 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 NPTX1Q15818 432 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CTF1Q16619 201 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 LRRC66Q68CR7 880 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 C2orf73Q8N5S3 287 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 PPP3R2Q96LZ3 170 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 PQBP1O60828 265 aaKnown RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 NDUFS2O75306 463 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 PGLSO95336 258 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 MT-ND2P03891 347 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 SDC1P18827 310 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CRISP3P54108 245 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 BCL2L1Q07817 233 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 SLC13A2Q13183 592 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 GBX1Q14549 363 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 IDO2Q6ZQW0 420 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 UBE2R2Q712K3 238 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 NLGN4XQ8N0W4 816 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 ATG16L2Q8NAA4 619 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 MED8Q96G25 268 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 PANX1Q96RD7 426 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 P2RY13Q9BPV8 354 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 REXO4Q9GZR2 422 aaKnown RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CLMPQ9H6B4 373 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 ZNF334Q9HCZ1 680 aaPredicted RBP12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 C1orf109Q9NX04 203 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 TAS2R16Q9NYV7 291 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CPQQ9Y646 472 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 CACNG2Q9Y698 323 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
KCNIP3-201ENST00000295225 H0YAE9 185 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 TULP3O75386 442 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 ACRV1P26436 265 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 ABRQ12979 859 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 CCDC71Q8IV32 467 aaPredicted RBP12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 ZNF420Q8TAQ5 688 aaPredicted RBP12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 FAR1Q8WVX9 515 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 SORCS1Q8WY21 1168 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 PROX1Q92786 737 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 TAMM41Q96BW9 452 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 NEURL2Q9BR09 285 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 POLE3Q9NRF9 147 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
KCNIP3-201ENST00000295225 SLCO3A1Q9UIG8 710 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms