RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 MEGF9Q9H1U4 602 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 MRM3Q9HC36 420 aaKnown RBP9.28□□□□□ -0.92
LRTM1-201ENST00000273286 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
LRTM1-201ENST00000273286 IRAK4Q9NWZ3 460 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 P4HTMQ9NXG6 502 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 SMARCAL1Q9NZC9 954 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 IL1RAPL1Q9NZN1 696 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 NXT1Q9UKK6 140 aaKnown RBP9.28□□□□□ -0.92
LRTM1-201ENST00000273286 PLCL2Q9UPR0 1127 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 ICKQ9UPZ9 632 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 MRFAP1Q9Y605 127 aa9.28□□□□□ -0.92
LRTM1-201ENST00000273286 UTP20O75691 2785 aaKnown RBP9.27□□□□□ -0.93
LRTM1-201ENST00000273286 ANKUB1A6NFN9 424 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 BTNL10A8MVZ5 291 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 PDPK1O15530 556 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 CBX6O95503 412 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 LDLRP01130 860 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 PVRP15151 417 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 MMP11P24347 488 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 ACADLP28330 430 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 GABRA4P48169 554 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
LRTM1-201ENST00000273286 NKAIN1Q4KMZ8 207 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 ZC3H12BQ5HYM0 836 aaKnown RBP9.27□□□□□ -0.93
LRTM1-201ENST00000273286 Q6ZS92 163 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 TXLNBQ8N3L3 684 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 TC2NQ8N9U0 490 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 OR5AR1Q8NGP9 310 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 NAT14Q8WUY8 206 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 ELMO1Q92556 727 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 PEX13Q92968 403 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 BARD1Q99728 777 aaKnown RBP9.27□□□□□ -0.93
LRTM1-201ENST00000273286 SLC26A1Q9H2B4 701 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 FAM96AQ9H5X1 160 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 XKR8Q9H6D3 395 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 WDR54Q9H977 334 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 FAM60AQ9NP50 221 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 RIMKLBQ9ULI2 386 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 TSC22D4Q9Y3Q8 395 aa9.27□□□□□ -0.93
LRTM1-201ENST00000273286 COPG1Q9Y678 874 aaKnown RBP9.27□□□□□ -0.93
LRTM1-201ENST00000273286 CENPEQ02224 2701 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ANKRD12Q6UB98 2062 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 PCM1Q15154 2024 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 A0A1B0GX78 115 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 SLC5A10A0PJK1 596 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 MIF4GDA9UHW6 222 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ISM1B1AKI9 464 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 CBSLP0DN79 551 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 MSNP26038 577 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 CBSP35520 551 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 RAB28P51157 221 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 NAP1L1P55209 391 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 PER3P56645 1201 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 CDH17Q12864 832 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 OLIG2Q13516 323 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 POU6F1Q14863 301 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 CDSNQ15517 529 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 PRR30Q53SZ7 412 aaPredicted RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 AARS2Q5JTZ9 985 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 TCTE1Q5JU00 501 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 B3GNTL1Q67FW5 361 aaPredicted RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ZNF585AQ6P3V2 769 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 NLRP9Q7RTR0 991 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 SYCE1Q8N0S2 351 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 SLC34A3Q8N130 599 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 RAB42Q8N4Z0 105 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 UBL4BQ8N7F7 174 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 UBE2Q2Q8WVN8 375 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ASZ1Q8WWH4 475 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 AJUBAQ96IF1 538 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 WDR77Q9BQA1 342 aaPredicted RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 TACO1Q9BSH4 297 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 RAB11FIP5Q9BXF6 653 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 EPS8L2Q9H6S3 715 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 C10orf88Q9H8K7 445 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ASF1BQ9NVP2 202 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 LUZP4Q9P127 313 aa9.26□□□□□ -0.93
LRTM1-201ENST00000273286 TDRKHQ9Y2W6 561 aaKnown RBP9.26□□□□□ -0.93
LRTM1-201ENST00000273286 ITPR2Q14571 2701 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 HEATR9A2RTY3 570 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 AQP7O14520 342 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 CNOT4O95628 575 aaKnown RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 ONECUT2O95948 504 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 IL18BPO95998 194 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 APOA4P06727 396 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 ITGA3P26006 1051 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 STIP1P31948 543 aaKnown RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 CDKN1CP49918 316 aaPredicted RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 RAPSNQ13702 412 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 GRM7Q14831 915 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 NAA25Q14CX7 972 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 ZIC1Q15915 447 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 DEFB110Q30KQ9 67 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 FAM214AQ32MH5 1076 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 C1orf189Q5VU69 101 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 FAM69BQ5VUD6 431 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 AGAP7PQ5VUJ5 663 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 FCRL6Q6DN72 434 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms