RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 CDH1P12830 882 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 GABRB3P28472 473 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 GRNP28799 593 aaKnown RBP14.39□□□□□ -0.11
SOD1-201ENST00000270142 CA7P43166 264 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 RGS4P49798 205 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 AGTR2P50052 363 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 ST13P50502 369 aaKnown RBP14.39□□□□□ -0.11
SOD1-201ENST00000270142 SP140Q13342 867 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 CRYMQ14894 314 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PHKG1Q16816 387 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 ZNF766Q5HY98 468 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 RNASEH2BQ5TBB1 312 aaKnown RBP14.39□□□□□ -0.11
SOD1-201ENST00000270142 CAPN13Q6MZZ7 669 aaPredicted RBP14.39□□□□□ -0.11
SOD1-201ENST00000270142 LRRC8EQ6NSJ5 796 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 H3F3CQ6NXT2 135 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PAQR3Q6TCH7 311 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 LCTLQ6UWM7 567 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 TMEM207Q6UWW9 146 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PCGF5Q86SE9 256 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 MYO1HQ8N1T3 1032 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 SLC13A3Q8WWT9 602 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PEX11GQ96HA9 241 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PBKQ96KB5 322 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 ZNF354BQ96LW1 612 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 SIGLEC12Q96PQ1 595 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 NPAS2Q99743 824 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 SGPP1Q9BX95 441 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 PARVBQ9HBI1 364 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 SUCOQ9UBS9 1254 aaKnown RBP14.39□□□□□ -0.11
SOD1-201ENST00000270142 SH3BGRL2Q9UJC5 107 aa14.39□□□□□ -0.11
SOD1-201ENST00000270142 ITPR2Q14571 2701 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 MYO9AB2RTY4 2548 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 ZNF860A6NHJ4 632 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 CCL21O00585 134 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 SLC16A5O15375 505 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 MAN1A2O60476 641 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 BANF1O75531 89 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 CDC123O75794 336 aaPredicted RBP14.38□□□□□ -0.11
SOD1-201ENST00000270142 MYBL2P10244 700 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 PGAM1P18669 254 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 CDKN2DP55273 166 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 RHAGQ02094 409 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 DHX9Q08211 1270 aaKnown RBP14.38□□□□□ -0.11
SOD1-201ENST00000270142 ART3Q13508 389 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 TUBA3CQ13748 450 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 ZXDCQ2QGD7 858 aaPredicted RBP14.38□□□□□ -0.11
SOD1-201ENST00000270142 ACER2Q5QJU3 275 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 TUBA3EQ6PEY2 450 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 PAPD4Q6PIY7 484 aaKnown RBP14.38□□□□□ -0.11
SOD1-201ENST00000270142 CRLF3Q8IUI8 442 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 MFSD9Q8NBP5 474 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 OR5T3Q8NGG3 340 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 M1APQ8TC57 530 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 TSLPQ969D9 159 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 LINGO1Q96FE5 620 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 HES7Q9BYE0 225 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 ANKRD10Q9NXR5 420 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 TAS2R13Q9NYV9 303 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 SLC17A6Q9P2U8 582 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 NAALAD2Q9Y3Q0 740 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 JRKLQ9Y4A0 524 aa14.38□□□□□ -0.11
SOD1-201ENST00000270142 PGRMC1O00264 195 aaKnown RBP14.37□□□□□ -0.11
SOD1-201ENST00000270142 SLC35G6P0C7Q6 338 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 NPPBP16860 134 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 CCND1P24385 295 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 GRK3P35626 688 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 PGGT1BP53609 377 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 MEF2AQ02078 507 aaPredicted RBP14.37□□□□□ -0.11
SOD1-201ENST00000270142 EXT1Q16394 746 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 MEP1AQ16819 746 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 SFT2D3Q587I9 215 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 MCEMP1Q8IX19 187 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 ZNF740Q8NDX6 193 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 MDS2Q8NDY4 140 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 PLPP5Q8NEB5 264 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 GRK7Q8WTQ7 553 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 PYCR2Q96C36 320 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 NAP1L3Q99457 506 aaPredicted RBP14.37□□□□□ -0.11
SOD1-201ENST00000270142 MMP25Q9NPA2 562 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 LANCL2Q9NS86 450 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 PCDHGB6Q9Y5F9 930 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 KLF2Q9Y5W3 355 aaPredicted RBP14.37□□□□□ -0.11
SOD1-201ENST00000270142 SLC22A7Q9Y694 548 aa14.37□□□□□ -0.11
SOD1-201ENST00000270142 CREBBPQ92793 2442 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 NDUFS4O43181 175 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 DNAJB6O75190 326 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 TSPAN12O95859 305 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 B3GALT4O96024 378 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 AHSGP02765 367 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 HIST1H2AGP0C0S8 130 aaPredicted RBP14.36□□□□□ -0.11
SOD1-201ENST00000270142 HIST1H2ADP20671 130 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 FNTAP49354 379 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 RBPJQ06330 500 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 USP10Q14694 798 aaKnown RBP14.36□□□□□ -0.11
SOD1-201ENST00000270142 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
SOD1-201ENST00000270142 ABRAXAS2Q15018 415 aa14.36□□□□□ -0.11
SOD1-201ENST00000270142 OR1C1Q15619 314 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms