RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 UGT2B7P16662 529 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 CTSKP43235 329 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
SS18-201ENST00000269137 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
SS18-201ENST00000269137 PRMT9Q6P2P2 845 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 OGFOD3Q6PK18 319 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 NET1Q7Z628 596 aaPredicted RBP13.51□□□□□ -0.25
SS18-201ENST00000269137 PAQR7Q86WK9 346 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 FAM20CQ8IXL6 584 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 MINDY1Q8N5J2 469 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 GPR156Q8NFN8 814 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 CLHC1Q8NHS4 586 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 CREB3L4Q8TEY5 395 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 FBXO4Q9UKT5 387 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 PI4KAP42356 2102 aa13.51□□□□□ -0.25
SS18-201ENST00000269137 A0A1B0GVT2 93 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 A8MUI8 341 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 C2orf74A8MZ97 194 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 FXYD1O00168 92 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PCDH7O60245 1069 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 NOBOXO60393 691 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 CIB2O75838 187 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PGRP06401 933 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 POLR2CP19387 275 aaPredicted RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 BCL6P41182 706 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 GRIA3P42263 894 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 DPP6P42658 865 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 DHPSP49366 369 aaPredicted RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 DGKQP52824 942 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 ZIC1Q15915 447 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SNCBQ16143 134 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 TRMT5Q32P41 509 aaKnown RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 FAM174BQ3ZCQ3 159 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PLK5Q496M5 336 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PIGGQ5H8A4 983 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PAGE3Q5JUK9 113 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 TMEM105Q8N8V8 129 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 DTWD2Q8NBA8 298 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 STARD8Q92502 1023 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 LRRC58Q96CX6 371 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 EGLN2Q96KS0 407 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 ANKMY1Q9P2S6 941 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 AP1M2Q9Y6Q5 423 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 MUC3AQ02505 3323 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 MDC1Q14676 2089 aaKnown RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 HAT1O14929 419 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 ANXA6P08133 673 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 RXRGP48443 463 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 RELAQ04206 551 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 SRSF5Q13243 272 aaKnown RBP13.5□□□□□ -0.25
SS18-201ENST00000269137 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PLD3Q8IV08 490 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 TRPV3Q8NET8 790 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 OR10G6Q8NH81 332 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.5□□□□□ -0.25
SS18-201ENST00000269137 NUDT8Q8WV74 236 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 NELL1Q92832 810 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 CENPKQ9BS16 269 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 SPAG4Q9NPE6 437 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 HRASLS2Q9NWW9 162 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 TMEM181Q9P2C4 612 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 CSNK1G3Q9Y6M4 447 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 DNAH14Q0VDD8 3507 aa13.5□□□□□ -0.25
SS18-201ENST00000269137 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 GSAPA4D1B5 854 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 OR5K3A6NET4 321 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 HRO43593 1189 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 S100A3P33764 101 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 CYP4F2P78329 520 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 ZNF763Q0D2J5 394 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 NFYCQ13952 458 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 TMEM35AQ53FP2 167 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 SPESP1Q6UW49 350 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 OOSP2Q86WS3 158 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 HPS6Q86YV9 775 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 WDR48Q8TAF3 677 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 WDR60Q8WVS4 1066 aa13.49□□□□□ -0.25
SS18-201ENST00000269137 ZC3H10Q96K80 434 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms