RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 H0YIV9 168 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CLIC3O95833 236 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 GGT1P19440 569 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 C5AR1P21730 350 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 LTBRP36941 435 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 HNF4AP41235 474 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CDK9P50750 372 aaKnown RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 BCAP31P51572 246 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 PPP2CBP62714 309 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 PPP2CAP67775 309 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 SGCGQ13326 291 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 DCDC5Q6ZRR9 648 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CLVS1Q8IUQ0 354 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 LRRC56Q8IYG6 542 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 IL17RCQ8NAC3 791 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CATSPER1Q8NEC5 780 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ZNF548Q8NEK5 533 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 SH3BP4Q9P0V3 963 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ADGRE2Q9UHX3 823 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 VPS4AQ9UN37 437 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 GPR34Q9UPC5 381 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 PCDHGA11Q9Y5H2 935 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 FEZF1A0PJY2 475 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 OR52A4PA6NMU1 304 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 J3QRK9 145 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 FPGTO14772 594 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ZBTB11O95625 1053 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 NPPAP01160 153 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ANXA6P08133 673 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 C1GALT1C1LP0DN25 315 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 HOXB2P14652 356 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 MAPK1P28482 360 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CSTF3Q12996 717 aaKnown RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 SMU1Q2TAY7 513 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 OTUD3Q5T2D3 398 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 THOC7Q6I9Y2 204 aaKnown RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 NUDT18Q6ZVK8 323 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 PDZD3Q86UT5 571 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 FLCNQ8NFG4 579 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 OR4K1Q8NGD4 311 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 OR8J3Q8NGG0 315 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 SLC5A11Q8WWX8 675 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 FAM120BQ96EK7 910 aaKnown RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 ITCHQ96J02 903 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 ZNF514Q96K75 400 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 DHRS1Q96LJ7 313 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 TBC1D23Q9NUY8 699 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 IMP3Q9NV31 184 aaKnown RBP13.06□□□□□ -0.32
VMP1-201ENST00000262291 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 GPSM3Q9Y4H4 160 aa13.06□□□□□ -0.32
VMP1-201ENST00000262291 RNGTTO60942 597 aaKnown RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 GNAO1P09471 354 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 PTPN6P29350 595 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 CTHP32929 405 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 WNT3P56703 355 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 CTBSQ01459 385 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 PRAMEF14Q5SWL7 426 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 PRAMEF13Q5VWM6 474 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 TBPL2Q6SJ96 375 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 LINC00615Q96LM1 132 aaPredicted RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 GDF15Q99988 308 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 SGPP1Q9BX95 441 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 CKAP5Q14008 2032 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 TRBV5-3A0A0A0MS03 114 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 GABRR3A8MPY1 467 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 H0Y8X5 98 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 RTCAO00442 366 aaKnown RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 CXCR6O00574 342 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 PCDH7O60245 1069 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 UGDHO60701 494 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 ADH1BP00325 375 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 NTRK1P04629 796 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 BMP2P12643 396 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 NTSR1P30989 418 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 EIF2DP41214 584 aaKnown RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 ADRM1Q16186 407 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 AASDHQ4L235 1098 aaPredicted RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 ANKRD34AQ69YU3 496 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 NXPE4Q6UWF7 544 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 RD3Q7Z3Z2 195 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 ANKFN1Q8N957 763 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 TP53I13Q8NBR0 393 aaPredicted RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 NETO1Q8TDF5 533 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 KCNH6Q9H252 994 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 KAT8Q9H7Z6 458 aaKnown RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 MAGEL2Q9UJ55 1249 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 CDC14AQ9UNH5 594 aa13.05□□□□□ -0.32
VMP1-201ENST00000262291 RUVBL1Q9Y265 456 aaKnown RBP13.05□□□□□ -0.32
VMP1-201ENST00000262291 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms