RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FAM83FQ8NEG4 500 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-201ENST00000261646 NPLOC4Q8TAT6 608 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 TMEM80Q96HE8 168 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 CD244Q9BZW8 370 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 MEIOCA2RUB1 952 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 PCDH7O60245 1069 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 UQCRC1P31930 480 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 CDH4P55283 916 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 ADARB1P78563 741 aaKnown RBP15.71■□□□□ 0.1
SREBF1-201ENST00000261646 SEMA3AQ14563 771 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 CAPN13Q6MZZ7 669 aaPredicted RBP15.71■□□□□ 0.1
SREBF1-201ENST00000261646 PSAPL1Q6NUJ1 521 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 MTSS1LQ765P7 747 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 FAM46DQ8NEK8 389 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 OR4K1Q8NGD4 311 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 TMEM40Q8WWA1 233 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 HCN2Q9UL51 889 aa15.71■□□□□ 0.1
SREBF1-201ENST00000261646 A0A1B0GVM2 712 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 SULT1C4O75897 302 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 GBAP04062 536 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 TCF3P15923 654 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 RYKP34925 604 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■■■□□ 17
SREBF1-201ENST00000261646 DTX3Q8N9I9 347 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 KHSRPQ92945 711 aaKnown RBP eCLIP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 USP7Q93009 1102 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 UCK2Q9BZX2 261 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 DCAF13Q9NV06 445 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 GOLGB1Q14789 3259 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 CPSF4LA6NMK7 179 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 SNAI1O95863 264 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 RETP07949 1114 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 PFKLP17858 780 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 EDNRBP24530 442 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 CD300CQ08708 224 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 INAVAQ3KP66 663 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 MED27Q6P2C8 311 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 CHMP1BQ7LBR1 199 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 TBX5Q99593 518 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 SLC29A3Q9BZD2 475 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 ZCCHC2Q9C0B9 1178 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 KCNN2Q9H2S1 579 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 LTB4R2Q9NPC1 389 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 M0R129 80 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 FHP07954 510 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 CYP2A6P11509 494 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 JUNBP17275 347 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 ARCN1P48444 511 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 KCNC1P48547 511 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 EPHB3P54753 998 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 PSMD4P55036 377 aaKnown RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 CBLBQ13191 982 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 TICAM1Q8IUC6 712 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 ISL2Q96A47 359 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 EQTNQ9NQ60 294 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 NLE1Q9NVX2 485 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-201ENST00000261646 COMMD9Q9P000 198 aa15.7■□□□□ 0.1
SREBF1-201ENST00000261646 A0A1W2PRB8 838 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 GABARAPO95166 117 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 GSRP00390 522 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 PCSK2P16519 638 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 NUP62P37198 522 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 KCNQ1P51787 676 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 SNX20Q7Z614 316 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 CNTN4Q8IWV2 1026 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 SLC5A8Q8N695 610 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 OR7G1Q8NGA0 311 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 BRI3BPQ8WY22 251 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 PDCD10Q9BUL8 212 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 PPIL3Q9H2H8 161 aaKnown RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 TREX1Q9NSU2 369 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 FAM120CQ9NX05 1096 aaKnown RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 SLC35F4A4IF30 521 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 TOXO94900 526 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 LRG1P02750 347 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 TNFRSF1BP20333 461 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 HOXA11P31270 313 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 MAGEA12P43365 314 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 EXOC3L2Q2M3D2 409 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 KCTD11Q693B1 232 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 XKRXQ6PP77 449 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 TMEM151AQ8N4L1 468 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 ADAMTS16Q8TE57 1224 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 MAT2BQ9NZL9 334 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 ECM29Q5VYK3 1845 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 A0A0D9SEW6 157 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 STOMP27105 288 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 NOXRED1Q6NXP6 359 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 DHRS4L2Q6PKH6 230 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
SREBF1-201ENST00000261646 RFKQ969G6 155 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 ASF1AQ9Y294 204 aa15.69■□□□□ 0.1
SREBF1-201ENST00000261646 SEPT4O43236 478 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 FCGRTP55899 365 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 SERINC3Q13530 473 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 CHRNA6Q15825 494 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 ATAD3CQ5T2N8 411 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 LIN54Q6MZP7 749 aa15.68■□□□□ 0.1
SREBF1-201ENST00000261646 MBOAT1Q6ZNC8 495 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms