RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 CACNG6Q9BXT2 260 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 PCBD2Q9H0N5 130 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 PMM2O15305 246 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 HSPA7P48741 367 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 C14orf105Q9NVL8 296 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 SULT1C2O00338 296 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 CLDN5O00501 218 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 RETP07949 1114 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 CRISP3P54108 245 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 DUSP4Q13115 394 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 CRB2Q5IJ48 1285 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 PYROXD2Q8N2H3 581 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 SIDT2Q8NBJ9 832 aaKnown RBP6.97□□□□□ -1.29
HERC2-201ENST00000261609 SIMC1Q8NDZ2 872 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 OR14K1Q8NGZ2 314 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 EXOSC8Q96B26 276 aaKnown RBP6.97□□□□□ -1.29
HERC2-201ENST00000261609 NDC1Q9BTX1 674 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 FZD10Q9ULW2 581 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 MGAT4BQ9UQ53 548 aa6.97□□□□□ -1.29
HERC2-201ENST00000261609 PRAMEF12O95522 483 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 CREMQ03060 361 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 ARMC1Q9NVT9 282 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 UGT2A1Q9Y4X1 527 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 APC2O95996 2303 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 C2CD4BA6NLJ0 364 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 PTPN9P43378 593 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 ATXN1P54253 815 aaKnown RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 CNTN2Q02246 1040 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 SLC16A9Q7RTY1 509 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 CCDC71Q8IV32 467 aaPredicted RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 ABHD16BQ9H3Z7 469 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 CLTCQ00610 1675 aaKnown RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 IL3P08700 152 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 TRIM23P36406 574 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 GFOD2Q3B7J2 385 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 C12orf45Q8N5I9 185 aaPredicted RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 TESCQ96BS2 214 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 PELOQ9BRX2 385 aaKnown RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 BRINP2Q9C0B6 783 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 SIX2Q9NPC8 291 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 MRPS33Q9Y291 106 aaKnown RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 SPATA31A1Q5TZJ5 1347 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 C4BPAP04003 597 aaKnown RBP6.96□□□□□ -1.29
HERC2-201ENST00000261609 PTGER3P43115 390 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 KCNAB2Q13303 367 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 GPR19Q15760 415 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 LINC00471Q8N535 108 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.96□□□□□ -1.291e-8■■■□□ 19.2
HERC2-201ENST00000261609 CNTN3Q9P232 1028 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 SCP2D1Q9UJQ7 156 aa6.96□□□□□ -1.29
HERC2-201ENST00000261609 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 E9PI62 339 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 FIBCD1Q8N539 461 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 SPPL2BQ8TCT7 592 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ZBED6CLQ96FA7 236 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 MEIOCA2RUB1 952 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ZNF705GA8MUZ8 300 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 PTPRAP18433 802 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 SCNN1GP51170 649 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 SP140Q13342 867 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ATAT1Q5SQI0 421 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 C22orf42Q6IC83 251 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 KIAA0930Q6ICG6 404 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 PAPD4Q6PIY7 484 aaKnown RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 HSH2DQ96JZ2 352 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 BORCS7-ASMTA0A0B4J1R7 106 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 C1QTNF3-AMACRE9PGA6 284 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 MATN3O15232 486 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 CLDN11O75508 207 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 PBX3P40426 434 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 GRM5P41594 1212 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 VLDLRP98155 873 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 DSG2Q14126 1118 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 GK3PQ14409 553 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 DENND1AQ8TEH3 1009 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ARL11Q969Q4 196 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 C7orf34Q96L11 122 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 IKZF4Q9H2S9 585 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 WASH6PQ9NQA3 447 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 TMEM45AQ9NWC5 275 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 TEX264Q9Y6I9 313 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 MT-ND5P03915 603 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 MRPL17Q9NRX2 175 aaKnown RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 STUB1Q9UNE7 303 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 NEDD8-MDP1E9PL57 170 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 EDNRAP25101 427 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 ALDH3B1P43353 468 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 AP1S1P61966 158 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 TLE2Q04725 743 aa6.96□□□□□ -1.3
HERC2-201ENST00000261609 MAD2L1BPQ15013 274 aaPredicted RBP6.96□□□□□ -1.3
HERC2-201ENST00000261609 ZNF529Q6P280 563 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms