RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CENPSQ8N2Z9 138 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 TEFMQ96QE5 360 aaKnown RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 CD244Q9BZW8 370 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 ZBP1Q9H171 429 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 MDC1Q14676 2089 aaKnown RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 GON4LQ3T8J9 2241 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 C1orf226A1L170 272 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 HIDE1A8MVS5 230 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 PDYNP01213 254 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 ITGA1P56199 1179 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 MADCAM1Q13477 382 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 LRRC70Q7Z2Q7 622 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 WDR53Q7Z5U6 358 aaPredicted RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 GALNT10Q86SR1 603 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 ZC3H7AQ8IWR0 971 aaKnown RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 OR2A12Q8NGT7 310 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 APIPQ96GX9 242 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 PPM1MQ96MI6 270 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 WFDC6Q9BQY6 131 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 GORASP2Q9H8Y8 452 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 KRT84Q9NSB2 600 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 CRNNQ9UBG3 495 aaPredicted RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 HS3ST2Q9Y278 367 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 SAMHD1Q9Y3Z3 626 aaKnown RBP8.88□□□□□ -0.99
RPA1-201ENST00000254719 PCDHGA8Q9Y5G5 932 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 CPQQ9Y646 472 aa8.88□□□□□ -0.99
RPA1-201ENST00000254719 IRGMA1A4Y4 181 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 PTGES3LE9PB15 166 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ATG13O75143 517 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 GABRR2P28476 465 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 MTHFRP42898 656 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CSNK1DP48730 415 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CDK9P50750 372 aaKnown RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 ELP6Q0PNE2 266 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SPIDRQ14159 915 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SF3B4Q15427 424 aaKnown RBP eCLIP8.87□□□□□ -0.992e-7■■■■■ 28.1
RPA1-201ENST00000254719 TRIM60Q495X7 471 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SPANXN4Q5MJ08 99 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 TPGS1Q6ZTW0 290 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ALDH16A1Q8IZ83 802 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 DCAF4L2Q8NA75 395 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 OR52E4Q8NGH9 312 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 OR5K1Q8NHB7 308 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ASB11Q8WXH4 323 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CAPNS2Q96L46 248 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 MUS81Q96NY9 551 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CPPED1Q9BRF8 314 aaPredicted RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 LINC00597Q9H2U6 94 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 KPNA3O00505 521 aaPredicted RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 SERPINB7O75635 380 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 DNAJB5O75953 348 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ZNF10P21506 573 aaPredicted RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 GJA8P48165 433 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ISL1P61371 349 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 RPS14P62263 151 aaKnown RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 MVKQ03426 396 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SMU1Q2TAY7 513 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CPTPQ5TA50 214 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 FAM46CQ5VWP2 391 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 FAM124AQ86V42 546 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 OOSP2Q86WS3 158 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 BEND7Q8N7W2 519 aaPredicted RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 UBE2FQ969M7 185 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 TPD52L3Q96J77 140 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 HTATIP2Q9BUP3 242 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CHID1Q9BWS9 393 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 AICDAQ9GZX7 198 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 HIPK3Q9H422 1215 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ZDHHC3Q9NYG2 299 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SOCS5O75159 536 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 AGXTP21549 392 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 HNF4AP41235 474 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SLC7A9P82251 487 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 IFITM3Q01628 133 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 IL18R1Q13478 541 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 DAG1Q14118 895 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ZBED5Q49AG3 693 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SPANXN2Q5MJ10 180 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 METTL2BQ6P1Q9 378 aaKnown RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 GALNT18Q6P9A2 607 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CLIP4Q8N3C7 705 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SLC15A4Q8N697 577 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 UTP15Q8TED0 518 aaKnown RBP8.87□□□□□ -0.99
RPA1-201ENST00000254719 APH1BQ8WW43 257 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 FCGR1BQ92637 280 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 KLHL25Q9H0H3 589 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SPNS1Q9H2V7 528 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 FAM83DQ9H4H8 585 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 ABCB8Q9NUT2 735 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 CLN6Q9NWW5 311 aa8.87□□□□□ -0.99
RPA1-201ENST00000254719 SERTM1A2A2V5 107 aa8.86□□□□□ -0.99
RPA1-201ENST00000254719 H3BMQ9 156 aa8.86□□□□□ -0.99
RPA1-201ENST00000254719 PLK4O00444 970 aa8.86□□□□□ -0.99
RPA1-201ENST00000254719 MPZL2O60487 215 aa8.86□□□□□ -0.99
RPA1-201ENST00000254719 B4GALT2O60909 372 aa8.86□□□□□ -0.99
RPA1-201ENST00000254719 PEX14O75381 377 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms