RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 KCNC4Q03721 635 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 SLC13A2Q13183 592 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 MAD2L1BPQ15013 274 aaPredicted RBP17.8■□□□□ 0.44
LRP3-201ENST00000253193 OXA1LQ15070 435 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 SERPINA11Q86U17 422 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 UBTD2Q8WUN7 234 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 TSEN34Q9BSV6 310 aaKnown RBP17.8■□□□□ 0.44
LRP3-201ENST00000253193 ITM2CQ9NQX7 267 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 C8AP07357 584 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 TM4SF4P48230 202 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 ELP6Q0PNE2 266 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 TTC23LQ6PF05 361 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 GAREM2Q75VX8 874 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 ADCK2Q7Z695 626 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 TSPYL5Q86VY4 417 aaPredicted RBP17.8■□□□□ 0.44
LRP3-201ENST00000253193 FIBINQ8TAL6 211 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 STARD8Q92502 1023 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 ALG14Q96F25 216 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 PALMDQ9NP74 551 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 DNMT3BQ9UBC3 853 aaKnown RBP17.8■□□□□ 0.44
LRP3-201ENST00000253193 BTBD3Q9Y2F9 522 aa17.8■□□□□ 0.44
LRP3-201ENST00000253193 ATG13O75143 517 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 ABLIM3O94929 683 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 C6orf47O95873 294 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 PABPC1P11940 636 aaKnown RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 HNF4AP41235 474 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 ASMTP46597 345 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 LGI4Q8N135 537 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 HUS1BQ8NHY5 278 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 NFKBIDQ8NI38 313 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 POP5Q969H6 163 aaKnown RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 SLC35A5Q9BS91 424 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 PIKFYVEQ9Y2I7 2098 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 TRBV5-4A0A0C4DH59 114 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 ARHGEF33A8MVX0 844 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 H3BN98 237 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 LEFTY1O75610 366 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 HOXB6P17509 224 aaKnown RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 RAB15P59190 212 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 HSD11B1LQ7Z5J1 315 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 AMER2Q8N7J2 671 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 PSD4Q8NDX1 1056 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 VPS35Q96QK1 796 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 IGHA2P01877 340 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 C1SP09871 688 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 MED27Q6P2C8 311 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 ST13P5Q8NFI4 369 aaPredicted RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 ZBTB20Q9HC78 741 aaPredicted RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 ACOT13Q9NPJ3 140 aa17.79■□□□□ 0.44
LRP3-201ENST00000253193 FNDC1Q4ZHG4 1894 aaPredicted RBP17.79■□□□□ 0.44
LRP3-201ENST00000253193 NKX2-5P52952 324 aaPredicted RBP17.78■□□□□ 0.44
LRP3-201ENST00000253193 ST8SIA6P61647 398 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 SLC5A8Q8N695 610 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 ITPAQ9BY32 194 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 POU2F3Q9UKI9 436 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 MAN2B2Q9Y2E5 1009 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 ANKDD1BA6NHY2 528 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 LZTS3O60299 673 aaPredicted RBP17.78■□□□□ 0.44
LRP3-201ENST00000253193 ITGAMP11215 1152 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 BMP4P12644 408 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 MC1RQ01726 317 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 PLEKHS1Q5SXH7 462 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 TRMT2BQ96GJ1 504 aaKnown RBP17.78■□□□□ 0.44
LRP3-201ENST00000253193 TRIM39Q9HCM9 518 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 GPR83Q9NYM4 423 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 ADAMDEC1O15204 470 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 NUAK1O60285 661 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 PCDHGA12O60330 932 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 OXSR1O95747 527 aaPredicted RBP17.78■□□□□ 0.44
LRP3-201ENST00000253193 STSP08842 583 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 ACPPP15309 386 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 CTSCP53634 463 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 SLBPQ14493 270 aaKnown RBP eCLIP17.78■□□□□ 0.44
LRP3-201ENST00000253193 GCNT6Q5T4J0 391 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 ZNF551Q7Z340 670 aaPredicted RBP17.78■□□□□ 0.44
LRP3-201ENST00000253193 CALHM3Q86XJ0 350 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 RAD18Q9NS91 495 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 PMF1-BGLAPU3KQ54 211 aa17.78■□□□□ 0.44
LRP3-201ENST00000253193 PFN3P60673 137 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 RPS3AP61247 264 aaKnown RBP17.77■□□□□ 0.44
LRP3-201ENST00000253193 SLC35A2P78381 396 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 SCARB2Q14108 478 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 LIPJQ5W064 366 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 ZDHHC20Q5W0Z9 365 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 Q8N9G6 341 aaPredicted RBP17.77■□□□□ 0.44
LRP3-201ENST00000253193 MROQ9BYG7 248 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 RNF208Q9H0X6 261 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 GIN1Q9NXP7 522 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 NEUROG3Q9Y4Z2 214 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 TTC36A6NLP5 189 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 CXCL14O95715 111 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 KLK1P06870 262 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 RAB33AQ14088 237 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 RGNQ15493 299 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 IFI44LQ53G44 452 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 CATSPEREQ5SY80 951 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 KDM4DQ6B0I6 523 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 LAIR1Q6GTX8 287 aa17.77■□□□□ 0.44
LRP3-201ENST00000253193 CAPN13Q6MZZ7 669 aaPredicted RBP17.77■□□□□ 0.44
LRP3-201ENST00000253193 TMEM150AQ86TG1 271 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms