RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MAGEB17A8MXT2 336 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 CDX4O14627 284 aaPredicted RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 ZSCAN9O15535 394 aaPredicted RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 OR1F1O43749 312 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ZBTB11O95625 1053 aaPredicted RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 ANKRD34CP0C6C1 535 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 PRPS2P11908 318 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 PCNAP12004 261 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 MAGP20916 626 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 CDH3P22223 829 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ACP1P24666 158 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ALDH4A1P30038 563 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 NEK2P51955 445 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ILKQ13418 452 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 SQLEQ14534 574 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 KIAA0040Q15053 153 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ZIC1Q15915 447 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ADPRMQ3LIE5 342 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 FCRL6Q6DN72 434 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 FBXO42Q6P3S6 717 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 TMEM71Q6P5X7 295 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 YTHDF3Q7Z739 585 aaKnown RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ZNF655Q8N720 491 aaPredicted RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 ANKRD53Q8N9V6 530 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ANKK1Q8NFD2 765 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 OR2T11Q8NH01 316 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 NT5CQ8TCD5 201 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 TSPEARQ8WU66 669 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 CHTF18Q8WVB6 975 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 CCDC74AQ96AQ1 378 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 QRFPRQ96P65 431 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 TRAPPC9Q96Q05 1148 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 OR2A5Q96R48 311 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 MTERF1Q99551 399 aaKnown RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 CDC6Q99741 560 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 MS4A8Q9BY19 250 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 BRINP2Q9C0B6 783 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 NMUR2Q9GZQ4 415 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ZNF385DQ9H6B1 395 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 SAR1AQ9NR31 198 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 SDR39U1Q9NRG7 319 aaPredicted RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 FARSBQ9NSD9 589 aaKnown RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 NCDNQ9UBB6 729 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 ADAM29Q9UKF5 820 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 EIF3LQ9Y262 564 aaKnown RBP12.38□□□□□ -0.43
LSM8-201ENST00000249299 ATP6AP2A0A1C7CYW4 349 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 E9PBE3 544 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 FCHO1O14526 889 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 HAT1O14929 419 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 KLHL41O60662 606 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PEX11AO75192 247 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ATP6AP2O75787 350 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 MYO1DO94832 1006 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CPNE6O95741 557 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 LDOC1O95751 146 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 SLC35G6P0C7Q6 338 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PRDX6P30041 224 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 BCL6P41182 706 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 OR1D5P58170 312 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 STX1BP61266 288 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 STXBP1P61764 594 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 YBX1P67809 324 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 DAB2P98082 770 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 HMGCS1Q01581 520 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TGM3Q08188 693 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ACSM2AQ08AH3 577 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TBL3Q12788 808 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 SGO1Q5FBB7 561 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CACHD1Q5VU97 1274 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 KHDRBS2Q5VWX1 349 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 ACSM2BQ68CK6 577 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TCEAL6Q6IPX3 200 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 NIPAL1Q6NVV3 410 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 IRGCQ6NXR0 463 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PAGE2Q7Z2X7 111 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 VN1R5Q7Z5H4 357 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ALYREFQ86V81 257 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 ZNF761Q86XN6 746 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.37□□□□□ -0.439e-6■■□□□ 11.8
LSM8-201ENST00000249299 C19orf47Q8N9M1 422 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 FNDC5Q8NAU1 212 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CAMKVQ8NCB2 501 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 OR4D9Q8NGE8 314 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 NCSTNQ92542 709 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TCEAL3Q969E4 200 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TM4SF19Q96DZ7 209 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ROGDIQ9GZN7 287 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SPNS1Q9H2V7 528 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 AIG1Q9NVV5 245 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SLC12A4Q9UP95 1085 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 DYTNA2CJ06 578 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms