RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 CPA6Q8N4T0 437 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 NDNFQ8TB73 568 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 UBE2FQ969M7 185 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 YIPF6Q96EC8 236 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 RIOK2Q9BVS4 552 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 CHST8Q9H2A9 424 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 PRM3Q9NNZ6 103 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 B3GNT3Q9Y2A9 372 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 CLDN25C9JDP6 229 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 H0YIV9 168 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 TSPAN6O43657 245 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 FAM20BO75063 409 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 AP2A2O94973 939 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 PSMB9P28065 219 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 AQP1P29972 269 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 KRT20P35900 424 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 OCA2Q04671 838 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 CLCA4Q14CN2 919 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 IQCCQ4KMZ1 466 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 SYTL3Q4VX76 610 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 BRAT1Q6PJG6 821 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 TSPYL5Q86VY4 417 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 RAVER1Q8IY67 606 aaKnown RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 GLMNQ92990 594 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 MAL2Q969L2 176 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 TCEAL4Q96EI5 215 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 C1orf226A1L170 272 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 SLC22A1O15245 554 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 RGS10O43665 173 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 LEFTY1O75610 366 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 ANXA4P09525 319 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 HNF4AP41235 474 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 CTSCP53634 463 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 DCDC1P59894 354 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 VBP1P61758 197 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 KCNJ10P78508 379 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 HTRA4P83105 476 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 GAB1Q13480 694 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF846Q147U1 533 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 SYT6Q5T7P8 510 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
HIF3A-202ENST00000244303 CPTPQ5TA50 214 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 P2RY8Q86VZ1 359 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 GPR156Q8NFN8 814 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 STARD8Q92502 1023 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 TMEM159Q96B96 161 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 C7orf34Q96L11 122 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 BCL7BQ9BQE9 202 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 BRF2Q9HAW0 419 aa13.87□□□□□ -0.19
HIF3A-202ENST00000244303 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 SLC16A8O95907 504 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 C9P02748 559 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 NTRK1P04629 796 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 IMPA1P29218 277 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 GJA8P48165 433 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 RPP38P78345 283 aaKnown RBP13.86□□□□□ -0.19
HIF3A-202ENST00000244303 NPRL3Q12980 569 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 CAMK2GQ13555 558 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-202ENST00000244303 RGNQ15493 299 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 TEAD2Q15562 447 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.86□□□□□ -0.19
HIF3A-202ENST00000244303 NPAS3Q8IXF0 933 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 TRAM1L1Q8N609 369 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 ZFP90Q8TF47 636 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 ATL1Q8WXF7 558 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 ABHD8Q96I13 439 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 HMG20AQ9NP66 347 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 ACOT13Q9NPJ3 140 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 NECTIN3Q9NQS3 549 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 DAPK2Q9UIK4 370 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 BTNL2Q9UIR0 455 aa13.86□□□□□ -0.19
HIF3A-202ENST00000244303 TTC36A6NLP5 189 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 M0R3G1 203 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 KPNA4O00629 521 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 PCDHGA12O60330 932 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 WBP4O75554 376 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ABCB1P08183 1280 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 HSD3B1P14060 373 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 IDSP22304 550 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 HSD3B2P26439 372 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 RRM2P31350 389 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ASMTP46597 345 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 RXRGP48443 463 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 TMED10P49755 219 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 CYP2A13Q16696 494 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ARSIQ5FYB1 569 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 TMEM215Q68D42 235 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ADIPOR2Q86V24 386 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 RASGEF1AQ8N9B8 481 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 OR7G3Q8NG95 312 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 HUS1BQ8NHY5 278 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms