RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ZUFSPQ96AP4 578 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 MKL2Q9ULH7 1088 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 MEMO1Q9Y316 297 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 HEATR5BQ9P2D3 2071 aa13.07□□□□□ -0.32
DDX39A-201ENST00000242776 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 H0YGG7 62 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 APOA4P06727 396 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 FAM153BP0C7A2 387 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 ABOP16442 354 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 CAPN3P20807 821 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 PSMA3P25788 255 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 STX2P32856 288 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 EFNA3P52797 238 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-201ENST00000242776 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
DDX39A-201ENST00000242776 FASTKQ14296 549 aaKnown RBP13.06□□□□□ -0.32
DDX39A-201ENST00000242776 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 FAM153CQ494X1 144 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 TTC23LQ6PF05 361 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 SPPL2CQ8IUH8 684 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 IGDCC3Q8IVU1 814 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 SHISA5Q8N114 240 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 BEST3Q8N1M1 668 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 OR2L3Q8NG85 312 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 OR13J1Q8NGT2 312 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 MFSD3Q96ES6 412 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 ZNF778Q96MU6 729 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 SIGLEC12Q96PQ1 595 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 WDR83Q9BRX9 315 aaKnown RBP13.06□□□□□ -0.32
DDX39A-201ENST00000242776 SYNPO2LQ9H987 977 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 MCCC2Q9HCC0 563 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 GPAMQ9HCL2 828 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 ABCF3Q9NUQ8 709 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 NINJ2Q9NZG7 142 aa13.06□□□□□ -0.32
DDX39A-201ENST00000242776 RUVBL1Q9Y265 456 aaKnown RBP13.06□□□□□ -0.32
DDX39A-201ENST00000242776 A0A0A6YYC8 382 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-201ENST00000242776 TARM1B6A8C7 271 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-201ENST00000242776 ANXA5P08758 320 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 ART1P52961 327 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
DDX39A-201ENST00000242776 FRG1Q14331 258 aaKnown RBP13.05□□□□□ -0.32
DDX39A-201ENST00000242776 BTBD16Q32M84 506 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 FBXO42Q6P3S6 717 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 RIPOR1Q6ZS17 1223 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 CAPN12Q6ZSI9 719 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 LANCL3Q6ZV70 420 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 RNF44Q7L0R7 432 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 LMNTD2Q8IXW0 634 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 AMER3Q8N944 861 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 OR6P1Q8NGX9 317 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 CALML6Q8TD86 181 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 AGAP11Q8TF27 550 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 ASZ1Q8WWH4 475 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 SDCCAG3Q96C92 435 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 C14orf79Q96F83 325 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 CERS2Q96G23 380 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 GPR137Q96N19 417 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 ZFYVE21Q9BQ24 234 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 DPH7Q9BTV6 452 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 PCDHGB6Q9Y5F9 930 aa13.05□□□□□ -0.32
DDX39A-201ENST00000242776 IGLV3-12A0A075B6K2 115 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 ZCWPW2A0A1B0GU75 182 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 OR2W5A6NFC9 320 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PFDN6O15212 129 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 GPC4O75487 556 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 VAPBO95292 243 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 ACSL3O95573 720 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 AGAP20933 346 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 DSG2Q14126 1118 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TMED2Q15363 201 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 KRTAP21-3Q3LHN1 58 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 FASTKD1Q53R41 847 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 AARS2Q5JTZ9 985 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 SPINK14Q6IE38 97 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 SUSD1Q6UWL2 747 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 C3orf62Q6ZUJ4 267 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 OTUD6BQ8N6M0 293 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CSNK1A1LQ8N752 337 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 OR4L1Q8NH43 312 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CA5BP1Q8WTZ4 195 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 UBLCP1Q8WVY7 318 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 NRGNQ92686 78 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CDKL2Q92772 493 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TTC1Q99614 292 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 FAM167BQ9BTA0 163 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TSSK1BQ9BXA7 367 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TXLNGYQ9BZA5 131 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 RNF32Q9H0A6 362 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CATSPERZQ9NTU4 200 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 C20orf96Q9NUD7 363 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 C14orf105Q9NVL8 296 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms