RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PCDHB18PQ96TA0 734 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TBCBQ99426 244 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 IFT27Q9BW83 186 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 TNFRSF19Q9NS68 423 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ARMC1Q9NVT9 282 aa10.81□□□□□ -0.68
MSH6-201ENST00000234420 ZNF230Q9UIE0 474 aaPredicted RBP10.81□□□□□ -0.68
MSH6-201ENST00000234420 ITGA10O75578 1167 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 GOT1P17174 413 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TTPAP49638 278 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 RPL11P62913 178 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 SYVN1Q86TM6 617 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 LIX1LQ8IVB5 337 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 PYROXD2Q8N2H3 581 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 OAZ3Q9UMX2 235 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TMEM98Q9Y2Y6 226 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 RPP14O95059 124 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 PAK4O96013 591 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 ADH5P11766 374 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 PRKCAP17252 672 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 EDNRAP25101 427 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 GSCP56915 257 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 ST3GAL4Q11206 333 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF268Q14587 947 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 LARS2Q15031 903 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 FUT10Q6P4F1 479 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 BORAQ6PGQ7 559 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZC3H14Q6PJT7 736 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TWIST2Q8WVJ9 160 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 LRCH3Q96II8 777 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 LRFN1Q9P244 771 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZMAT5Q9UDW3 170 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 SEC14L5O43304 696 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SHOX2O60902 331 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 PAGE1O75459 146 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 HLA-EP13747 358 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 GRK6P43250 576 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 KIR3DL1P43629 444 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 POU4F2Q12837 409 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 FGFBP1Q14512 234 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 C14orf28Q4W4Y0 310 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 GKN2Q86XP6 184 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 CNTD1Q8N815 330 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 DOK4Q8TEW6 326 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 TCEAL7Q9BRU2 100 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 RTFDC1Q9BY42 306 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 ACSS3Q9H6R3 686 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 LRTM1Q9HBL6 345 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SERINC1Q9NRX5 453 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF355PQ9NSJ1 428 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 PADI3Q9ULW8 664 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 RPL36Q9Y3U8 105 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 RPS17P08708 135 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 CTBP2P56545 445 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 PAOXQ6QHF9 649 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TMEM86AQ8N2M4 240 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF565Q8N9K5 539 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TAS2R14Q9NYV8 317 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 TMX2Q9Y320 296 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 RAD51DO75771 328 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 CNOT4O95628 575 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 C8BP07358 591 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SLC6A3Q01959 620 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 NTRK3Q16288 839 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF527Q8NB42 609 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SLAMF7Q9NQ25 335 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SPEF2Q9C093 1822 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 HTR3EA5X5Y0 456 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 CXCR6O00574 342 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 FHP07954 510 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 SLURP2P0DP57 97 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 BMP6P22004 513 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 CXCR1P25024 350 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 HES5Q5TA89 166 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 ZNF100Q8IYN0 542 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 CNEP1R1Q8N9A8 125 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 EBNA1BP2Q99848 306 aaKnown RBP10.8□□□□□ -0.68
MSH6-201ENST00000234420 SAMD10Q9BYL1 202 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 PLEKHM1Q9Y4G2 1056 aa10.8□□□□□ -0.68
MSH6-201ENST00000234420 H3BQ06 376 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 AHSA1O95433 338 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CTHP32929 405 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ZNF41P51814 821 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 NIPAL4Q0D2K0 466 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 IL23RQ5VWK5 629 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ISOC1Q96CN7 298 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 FAM118AQ9NWS6 357 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ADAM18Q9Y3Q7 739 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 GRIN2DO15399 1336 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CNTNAP5Q8WYK1 1306 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms