RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ARMC4Q5T2S8 1044 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3GQ6DHY5 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3CQ6IPX1 549 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 CYHR1Q6ZMK1 362 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 TBC1D3Q8IZP1 549 aaPredicted RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 HDAC2Q92769 488 aaKnown RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 FATE1Q969F0 183 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 FNDC11Q9BVV2 318 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 FAM120CQ9NX05 1096 aaKnown RBP13.12□□□□□ -0.31
RAB3D-201ENST00000222120 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 GMEB1Q9Y692 573 aa13.12□□□□□ -0.31
RAB3D-201ENST00000222120 FAM92AA1XBS5 289 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 H7BY64 318 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PI15O43692 258 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 F11P03951 625 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 BMP1P13497 986 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ZNF30P17039 623 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 LHCGRP22888 699 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 NTSP30990 170 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RPL3P39023 403 aaKnown RBP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 SEC13P55735 322 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RPS3AP61247 264 aaKnown RBP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TBPL1P62380 186 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PTSQ03393 145 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 NFATC3Q12968 1075 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 SPATS1Q496A3 300 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 XKR7Q5GH72 579 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TMIGD1Q6UXZ0 262 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 DLEU7Q6UYE1 221 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 GOLM1Q8NBJ4 401 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 FNDC8Q8TC99 324 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 SGCDQ92629 289 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ARMC5Q96C12 935 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PRAP1Q96NZ9 151 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 M0R129 80 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PSMD11O00231 422 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ARNTLO00327 626 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ADH5P11766 374 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RXRGP48443 463 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 NCF4Q15080 339 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TEAD4Q15561 434 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 NAGSQ8N159 534 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 KLHL3Q9UH77 587 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 SARDHQ9UL12 918 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ABCG2Q9UNQ0 655 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 CLPXO76031 633 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TCF3P15923 654 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 CLCN2P51788 898 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 DNASE1L3Q13609 305 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
RAB3D-201ENST00000222120 ARMC8Q8IUR7 673 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 OR7G3Q8NG95 312 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 OR14C36Q8NHC7 312 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 EID2BQ96D98 161 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 XKR8Q9H6D3 395 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
RAB3D-201ENST00000222120 H3BNC9 293 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 UGT2B15P54855 530 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 NFE2L1Q14494 772 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 DCP2Q8IU60 420 aaKnown RBP13.1□□□□□ -0.31
RAB3D-201ENST00000222120 DPP10Q8N608 796 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
RAB3D-201ENST00000222120 EFCAB11Q9BUY7 163 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 NTMT1Q9BV86 223 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
RAB3D-201ENST00000222120 STOX2Q9P2F5 926 aaPredicted RBP13.1□□□□□ -0.31
RAB3D-201ENST00000222120 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
RAB3D-201ENST00000222120 KCNK6Q9Y257 313 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 C9P02748 559 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 PTGER1P34995 402 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 C2orf27AQ580R0 203 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 ZNF805Q5CZA5 627 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
RAB3D-201ENST00000222120 ATAD3BQ5T9A4 648 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms