RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 TNFRSF1BP20333 461 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 CACNB2Q08289 660 aaPredicted RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 UAP1L1Q3KQV9 507 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 SLC25A52Q3SY17 297 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 KCTD11Q693B1 232 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 LETMD1Q6P1Q0 360 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 PAQR3Q6TCH7 311 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF621Q6ZSS3 439 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 HFE2Q6ZVN8 426 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TMPRSS9Q7Z410 1059 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TSPEARQ8WU66 669 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 KLHL6Q8WZ60 621 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 SMG7Q92540 1137 aaKnown RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 L3HYPDHQ96EM0 354 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TSSK3Q96PN8 268 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 OR12D3Q9UGF7 316 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 STON1Q9Y6Q2 735 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 VPS26AO75436 327 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 CFDP00746 253 aaPredicted RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 FGF4P08620 206 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ARSDP51689 593 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 WNT3AP56704 352 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF273Q14593 569 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 DUSP6Q16828 381 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ZC3H12BQ5HYM0 836 aaKnown RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 OTUB1Q96FW1 271 aaPredicted RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 NXF2Q9GZY0 626 aaKnown RBP14.18□□□□□ -0.14
PTPRA-201ENST00000216877 GHITMQ9H3K2 345 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 C3orf14Q9HBI5 128 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 SDHAF2Q9NX18 166 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 CLEC4AQ9UMR7 237 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 PCDHGA6Q9Y5G7 932 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TCRBV16S1A1N1A0A5B0 115 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 H7C2Y5 167 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 CASKO14936 926 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 NCAM2O15394 837 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 STBD1O95210 358 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 DHFRP00374 187 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 PIGRP01833 764 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 LHCGRP22888 699 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TRILQ7L0X0 811 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 APH1BQ8WW43 257 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 TRIP11Q15643 1979 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 PPEF2O14830 753 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ECI2O75521 394 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 CD1DP15813 335 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 HOXA9P31269 272 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ETV6P41212 452 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 GEMP55040 296 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 HSF2Q03933 536 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 KDM4DQ6B0I6 523 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ABHD15Q6UXT9 468 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 VSIG10LQ86VR7 867 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 FTMTQ8N4E7 242 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF655Q8N720 491 aaPredicted RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 MYO19Q96H55 970 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 DPH2Q9BQC3 489 aaPredicted RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 TMEM134Q9H6X4 195 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 NT5MQ9NPB1 228 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 SLC52A3Q9NQ40 469 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 DNAJC11Q9NVH1 559 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 RBFOX1Q9NWB1 397 aaKnown RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 PCNTO95613 3336 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 RGS11O94810 467 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 P2RY14Q15391 338 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 RTL4Q6ZR62 310 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 REPS1Q96D71 796 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ZBED6CLQ96FA7 236 aaPredicted RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 IER2Q9BTL4 223 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 GSX2Q9BZM3 304 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 WDCPQ9H6R7 721 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 EMC3Q9P0I2 261 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 PFDN2Q9UHV9 154 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 ELF5Q9UKW6 265 aaPredicted RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 SAMD4AQ9UPU9 718 aaKnown RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 CLCA2Q9UQC9 943 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 AKT3Q9Y243 479 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 TRAPPC4Q9Y296 219 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 USP3Q9Y6I4 520 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 GSAPA4D1B5 854 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 F8W810 466 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 HPGDSO60760 199 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 AOC2O75106 756 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 OPN1SWP03999 348 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 PRSS56P0CW18 603 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 SLC2A3P11169 496 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 RAB3AP20336 220 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 STOMP27105 288 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 SDC2P34741 201 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 TKTL1P51854 596 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 TIGD3Q6B0B8 471 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 CNIH2Q6PI25 160 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 STK40Q8N2I9 435 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 LIX1Q8N485 282 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 OR52H1Q8NGJ2 320 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 GLOD4Q9HC38 313 aa14.17□□□□□ -0.14
PTPRA-201ENST00000216877 YARS2Q9Y2Z4 477 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms