RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RASAL1O95294 804 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 IVDP26440 423 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 XCR1P46094 333 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 CDKN2DP55273 166 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 AP1S2P56377 157 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 DHX9Q08211 1270 aaKnown RBP14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PWP1Q13610 501 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PHKG1Q16816 387 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 DUPD1Q68J44 220 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 CAPN13Q6MZZ7 669 aaPredicted RBP14.98□□□□□ -0.01
ERCC1-201ENST00000013807 ANKRD37Q7Z713 158 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 ASPGQ86U10 573 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 SLC26A11Q86WA9 606 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PDSS2Q86YH6 399 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 SHISA5Q8N114 240 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 MYO1HQ8N1T3 1032 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 MFSD9Q8NBP5 474 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 KCT2Q8NC54 265 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 OR56A3Q8NH54 315 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 M1APQ8TC57 530 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 SLC13A3Q8WWT9 602 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PDLIM5Q96HC4 596 aaKnown RBP14.98□□□□□ -0.01
ERCC1-201ENST00000013807 NDNQ99608 321 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 HAUS8Q9BT25 410 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 ATG10Q9H0Y0 220 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 PLAC1Q9HBJ0 212 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 ANKHQ9HCJ1 492 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 MMP25Q9NPA2 562 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 ABCF3Q9NUQ8 709 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 CORO1CQ9ULV4 474 aaPredicted RBP14.98□□□□□ -0.01
ERCC1-201ENST00000013807 CACNA1CQ13936 2221 aa14.98□□□□□ -0.01
ERCC1-201ENST00000013807 GOLGA6L10A0A0M3HER8 536 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 FEZF1A0PJY2 475 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 ZG16O60844 167 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 HIST1H2AGP0C0S8 130 aaPredicted RBP14.97□□□□□ -0.01
ERCC1-201ENST00000013807 IL1RNP18510 177 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 HIST1H2ADP20671 130 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 GRK3P35626 688 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 IL2P60568 153 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 RHAGQ02094 409 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 NAE1Q13564 534 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 FRG1Q14331 258 aaKnown RBP14.97□□□□□ -0.01
ERCC1-201ENST00000013807 EXT1Q16394 746 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 MSS51Q4VC12 460 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 ACER2Q5QJU3 275 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 RBM20Q5T481 1227 aaKnown RBP14.97□□□□□ -0.01
ERCC1-201ENST00000013807 C1QL3Q5VWW1 255 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 NIPAL1Q6NVV3 410 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 MBOAT1Q6ZNC8 495 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 LANCL3Q6ZV70 420 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 SUN3Q8TAQ9 357 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 CERS2Q96G23 380 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 HIST1H2AHQ96KK5 128 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 ZNF354BQ96LW1 612 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 HIST1H2AJQ99878 128 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 H2AFJQ9BTM1 129 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.97□□□□□ -0.01
ERCC1-201ENST00000013807 CLK4Q9HAZ1 481 aaKnown RBP14.97□□□□□ -0.01
ERCC1-201ENST00000013807 LANCL2Q9NS86 450 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 SNX12Q9UMY4 172 aa14.97□□□□□ -0.01
ERCC1-201ENST00000013807 MAGEB17A8MXT2 336 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 SGK494L7N484 410 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 SEC24DO94855 1032 aaPredicted RBP14.96□□□□□ -0.01
ERCC1-201ENST00000013807 ENO2P09104 434 aaPredicted RBP14.96□□□□□ -0.01
ERCC1-201ENST00000013807 SLC35G6P0C7Q6 338 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 CDH1P12830 882 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 MST1P26927 711 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 ZNF33BQ06732 778 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 CBLBQ13191 982 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 ART3Q13508 389 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 HERC3Q15034 1050 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 BTBD16Q32M84 506 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 MINDY4Q4G0A6 757 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 TEDDM1Q5T9Z0 273 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 DCHS2Q6V1P9 2916 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 IGDCC3Q8IVU1 814 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 LGI4Q8N135 537 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 AMER2Q8N7J2 671 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 MDS2Q8NDY4 140 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 ANKRD7Q92527 254 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 SNF8Q96H20 258 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 MAGEB10Q96LZ2 347 aaPredicted RBP14.96□□□□□ -0.01
ERCC1-201ENST00000013807 OR4K3Q96R72 315 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 MACROD1Q9BQ69 325 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 VWA7Q9Y334 891 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 NAALAD2Q9Y3Q0 740 aa14.96□□□□□ -0.01
ERCC1-201ENST00000013807 KLF2Q9Y5W3 355 aaPredicted RBP14.96□□□□□ -0.01
ERCC1-201ENST00000013807 IGHV3-20A0A0C4DH32 117 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 TRBC2A0A5B9 178 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 HNRNPRO43390 633 aaKnown RBP14.95□□□□□ -0.02
ERCC1-201ENST00000013807 GALR3O60755 368 aaPredicted RBP14.95□□□□□ -0.02
ERCC1-201ENST00000013807 STATHP02808 62 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 AHRP35869 848 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 CCR8P51685 355 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 KCNK10P57789 538 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 PPP1R7Q15435 360 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 GFRALQ6UXV0 394 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 FJX1Q86VR8 437 aa14.95□□□□□ -0.02
ERCC1-201ENST00000013807 ZNF740Q8NDX6 193 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms