RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OR10G2Q8NGC3 310 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 MYDGFQ969H8 173 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 DUSP26Q9BV47 211 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CWH43Q9H720 699 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 MS4A12Q9NXJ0 267 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 SH3BP4Q9P0V3 963 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 PCDHGB6Q9Y5F9 930 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CTSOP43234 321 aaPredicted RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 RGS6P49758 472 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 SPIBQ01892 262 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CRHR2Q13324 411 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 MED22Q15528 200 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 RSBN1Q5VWQ0 802 aaPredicted RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 PNCKQ6P2M8 343 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 ASB11Q8WXH4 323 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 ZNF486Q96H40 463 aaPredicted RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CCM2Q9BSQ5 444 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 DNAJC11Q9NVH1 559 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 FBXL12Q9NXK8 326 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 ISPDA4D126 451 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 E7EQ34 232 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 TAF4O00268 1085 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 HAT1O14929 419 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 KIAA0513O60268 411 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 CCNKO75909 580 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 NSG1P42857 185 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 SLC6A12P48065 614 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 HNRNPFP52597 415 aaKnown RBP13.52□□□□□ -0.24
USH1C-201ENST00000005226 PFN3P60673 137 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 AP1S1P61966 158 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 ABRQ12979 859 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 DMC1Q14565 340 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.24
USH1C-201ENST00000005226 TBCEQ15813 527 aaPredicted RBP13.52□□□□□ -0.24
USH1C-201ENST00000005226 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 FAM180BQ6P0A1 224 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 C1orf52Q8N6N3 182 aaKnown RBP13.52□□□□□ -0.24
USH1C-201ENST00000005226 L3MBTL4Q8NA19 623 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 B3GNT7Q8NFL0 401 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 NEDD4LQ96PU5 975 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 SLC12A9Q9BXP2 914 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 GABARAPL3Q9BY60 117 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 TPK1Q9H3S4 243 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 NEK6Q9HC98 313 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 VPS29Q9UBQ0 182 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 ITGB1BP2Q9UKP3 347 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 ACSL6Q9UKU0 697 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 IFT52Q9Y366 437 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 PCDHGA2Q9Y5H1 932 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 NOX1Q9Y5S8 564 aa13.52□□□□□ -0.24
USH1C-201ENST00000005226 PCDH17O14917 1159 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 GALTP07902 379 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 LHCGRP22888 699 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 POU1F1P28069 291 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 GJA8P48165 433 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 TGM4P49221 684 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.25
USH1C-201ENST00000005226 RGNQ15493 299 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 TSTQ16762 297 aaKnown RBP13.52□□□□□ -0.25
USH1C-201ENST00000005226 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
USH1C-201ENST00000005226 ERICH5Q6P6B1 374 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 LRRC70Q7Z2Q7 622 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 GATAD2AQ86YP4 633 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 FAM217AQ8IXS0 508 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 LGI4Q8N135 537 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 ARL14EPQ8N8R7 260 aaPredicted RBP13.52□□□□□ -0.25
USH1C-201ENST00000005226 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
USH1C-201ENST00000005226 MED8Q96G25 268 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 SAMD11Q96NU1 681 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 SDHCQ99643 169 aaPredicted RBP13.52□□□□□ -0.25
USH1C-201ENST00000005226 EPYCQ99645 322 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 DOHHQ9BU89 302 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 ZDHHC3Q9NYG2 299 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 PCDHGA3Q9Y5H0 932 aa13.52□□□□□ -0.25
USH1C-201ENST00000005226 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 E9PQ18 207 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 FAM227AF5H4B4 570 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 H3BM21 787 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 DYRK3O43781 588 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 SLC10A3P09131 477 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 CAP1Q01518 475 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 PTSQ03393 145 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 ACSM2AQ08AH3 577 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 IER5LQ5T953 404 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 ACSM2BQ68CK6 577 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 GPR155Q7Z3F1 870 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms