RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ikzf4Q8C208 586 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Cnot2Q8C5L3 540 aaKnown RBP8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tp53bp2Q8CG79 1128 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sox30Q8CGW4 782 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 BtdQ8CIF4 520 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Olfr395Q8VGR3 312 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tc2nQ91XT6 489 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pcdhb4Q91XZ6 784 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Nus1Q99LJ8 297 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Bcl2l14Q9CPT0 328 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tysnd1Q9DBA6 568 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Snap29Q9ERB0 260 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Insm2Q9JMC2 493 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Eci2Q9WUR2 391 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 CnmdQ9Z1F6 334 aa8.76□□□□□ -1.01
Upf3b-201ENSMUST00000076265 TriqkB2B9E1 86 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ankrd44B2RXR6 993 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Zfp558E9Q1J0 407 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gpr137cE9Q343 423 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ighg2cF6TQW2 404 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gm17654F7AXR3 209 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ephb6O08644 1014 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 RbpjlO08674 515 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 PhyhO35386 338 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pcdha4O88689 947 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 P01864 335 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pnliprp2P17892 482 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gna11P21278 359 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sstr3P30935 428 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 PtgfrP43117 366 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Cntn5P68500 1098 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 McptlQ00356 246 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Itga4Q00651 1039 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tgm3Q08189 693 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Patl1Q3TC46 770 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gprin1Q3UNH4 932 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Slc5a10Q5SWY8 596 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 BocQ6AZB0 1110 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Vmn2r43Q80Z08 845 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Nutm1Q8BHP2 1126 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ago1Q8CJG1 857 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 PiguQ8K358 434 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Q8R092 253 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Olfr679Q8VGV0 315 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Acot11Q8VHQ9 594 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 PigxQ99LV7 254 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tbx19Q99ME7 446 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Spg21Q9CQC8 308 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Mgat4cQ9D306 478 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Phospho2Q9D9M5 241 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Klrc1Q9Z202 244 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 CluhQ5SW19 1315 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pappa2E9PZ87 1789 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Olfr1326-ps1A0A140T8J7 311 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pgm2A2CEK3 580 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gm281D3Z1Y0 860 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Lrrc31F6VYM1 502 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Prrt1O35449 306 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 AanatO88816 205 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 CcnkO88874 554 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Anxa1P10107 346 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gas2P11862 314 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Cd68P31996 326 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tia1P52912 386 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Fermt1P59113 677 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Rps15P62843 145 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ucp2P70406 309 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pde7aP70453 456 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 StacP97306 403 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 MpgQ04841 333 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Q3TEI4 1023 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tstd2Q3U269 495 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Fam83fQ3UKU4 495 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gcnt7Q3V3K7 433 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Lrig2Q52KR2 1054 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Bloc1s3Q5U5M8 195 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Cln3Q61124 438 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Nt5eQ61503 576 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Papd5Q68ED3 633 aaKnown RBP8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Asic1Q6NXK8 526 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 LcorQ6ZPI3 433 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Zfp324Q78F42 583 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Mtmr10Q7TPM9 771 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tmprss11fQ8BHM9 439 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Lrfn3Q8BLY3 626 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Hus1Q8BQY8 280 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Nhlrc1Q8BR37 401 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Slc41a2Q8BYR8 573 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 AidaQ8C4Q6 305 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Slc46a2Q8CA03 479 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Plcxd1Q8CHS4 345 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 DctdQ8K2D6 178 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Vmn1r212Q8R268 357 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Tmem143Q8VD26 458 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Polr3fQ921X6 316 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Adgrl4Q923X1 739 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Msh4Q99MT2 958 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sytl2Q99N50 950 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pgm1Q9D0F9 562 aa8.75□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Lpar3Q9EQ31 354 aa8.75□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms