RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 KptnQ8VCX6 430 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr1391Q8VFA4 311 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Diras1Q91Z61 198 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pdk3Q922H2 415 aaKnown RBP8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 ScelQ9EQG3 652 aa8.38□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm43796A0A0J9YV32 372 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Kctd14A0A0U1RNG7 287 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cylc1A0A1B0GR13 642 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Itga8A2ARA8 1062 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 F2rl3O88634 396 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Wnt1P04426 370 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmco2P0C1V4 183 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sbk2P0C5K1 362 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc1a5P51912 553 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 AdslP54822 484 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ypel5P62700 121 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Polr2cP97760 275 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 GiprQ0P543 460 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tstd2Q3U269 495 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Osbp2Q5QNQ6 908 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 RflnbQ5SVD0 216 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rcbtb1Q6NXM2 531 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dennd5aQ6PAL8 1287 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tspan12Q8BKT6 305 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Clasp2Q8BRT1 1286 aaKnown RBP8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Snapc1Q8K0S9 389 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn1r205Q8R276 316 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 AenQ9CZI9 336 aaKnown RBP8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Haus5Q9D786 619 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Insm2Q9JMC2 493 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ap1m2Q9WVP1 423 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mbd4Q9Z2D7 554 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cacna1bO55017 2327 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm3952A0A0A6YXJ1 191 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Xlr5bA2BI50 236 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp395E9Q5N9 508 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Defa-rs2P17534 91 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Aqp1Q02013 269 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Inf2Q0GNC1 1273 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem38aQ3TMP8 298 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lrrn4clQ3TYX2 239 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Eef2kmtQ3UZW7 335 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rassf5Q5EBH1 413 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Grb10Q60760 621 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pkp4Q68FH0 1190 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dcaf13Q6PAC3 445 aaKnown RBP8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rbm11Q80YT9 238 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rhox11Q810N8 206 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Q8BL95 290 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm9881Q8BR56 211 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zhx3Q8C0Q2 951 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Q8C3I9 435 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fbxl3Q8C4V4 428 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc35e2Q8C811 405 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Samd14Q8K070 417 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 HibchQ8QZS1 385 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr347Q8VGK2 312 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr394Q8VGR5 310 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lrrc26Q91W20 331 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rabep2Q91WG2 554 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cd209aQ91ZX1 238 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mcm8Q9CWV1 833 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 NpvfQ9ESQ8 188 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tgm1Q9JLF6 815 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dmrt1Q9QZ59 374 aa8.37□□□□□ -1.07
Trim39-201ENSMUST00000042717 TectaO08523 2155 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 B020011L13RikA0A087WQI7 412 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm5141A0A0J9YUW3 581 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trmt1lA2RSY6 728 aaKnown RBP8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hk2O08528 917 aaKnown RBP8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Foxq1O70220 400 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 BdnfP21237 249 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mbl1P39039 239 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Eef1a2P62631 463 aaKnown RBP8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Kcna7Q17ST2 489 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Nol9Q3TZX8 714 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ffar3Q3UFD7 319 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pfdn4Q3UWL8 134 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Myo1dQ5SYD0 1006 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Als2clQ60I26 952 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gngt2Q61017 69 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hspa1aQ61696 641 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 ManeaQ6NXH2 462 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fbxo22Q78JE5 402 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Adamtsl2Q7TSK7 957 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Snx32Q80ZJ7 404 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc25a12Q8BH59 677 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cd99l2Q8BIF0 237 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mtrf1lQ8BJU9 373 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mfsd6Q8CBH5 775 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sidt2Q8CIF6 832 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zbtb8bQ8CII0 484 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ugt2b34Q8K154 532 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zcchc9Q8R1J3 271 aaKnown RBP8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ints14Q8R3P6 515 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr437Q8VEV1 310 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr666Q8VH00 318 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pcdha8Q91Y12 946 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klk6Q91Y82 253 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Nck1Q99M51 377 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms