RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SPATA1Q5VX52 437 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 KRT39Q6A163 491 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 CYB5D1Q6P9G0 228 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 CEACAM19Q7Z692 300 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 IQCHQ86VS3 1027 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 TDRD5Q8NAT2 981 aaKnown RBP3.77□□□□□ -1.81
CCDC7-216ENST00000640058 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 BTBD9Q96Q07 612 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 CDCA3Q99618 268 aaPredicted RBP3.77□□□□□ -1.81
CCDC7-216ENST00000640058 DNAI2Q9GZS0 605 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 NLGN3Q9NZ94 848 aa3.77□□□□□ -1.81
CCDC7-216ENST00000640058 IGLV4-3A0A075B6K6 122 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 MTMR11A4FU01 709 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 HMGB1P1B2RPK0 211 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-216ENST00000640058 CLDN4O14493 209 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 TLX2O43763 284 aaPredicted RBP3.76□□□□□ -1.81
CCDC7-216ENST00000640058 SLCO2B1O94956 709 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 NXPH4O95158 308 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 CELF2O95319 508 aaKnown RBP3.76□□□□□ -1.81
CCDC7-216ENST00000640058 STARD3NLO95772 234 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 HPP00738 406 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 BDNFP23560 247 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 CSE1LP55060 971 aaKnown RBP3.76□□□□□ -1.81
CCDC7-216ENST00000640058 CLDN15P56746 228 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 ALCAMQ13740 583 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 SPECC1Q5M775 1068 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 RCOR2Q8IZ40 523 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 OR4D10Q8NGI6 311 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 OR4C15Q8NGM1 316 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 OR10G7Q8NGN6 311 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 UBAC1Q9BSL1 405 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 ADNPQ9H2P0 1102 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 GTSE1Q9NYZ3 720 aa3.76□□□□□ -1.81
CCDC7-216ENST00000640058 TRAV24A0A0B4J272 114 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 TCRBV21S2A2A0A5A6 115 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 TRBC2A0A5B9 178 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 GPRIN2O60269 458 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 CYTIPO60759 359 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 SELEP16581 610 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 PIK3R1P27986 724 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 ATP4BP51164 291 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 UBASH3AP57075 661 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 IFI35P80217 286 aaPredicted RBP3.75□□□□□ -1.81
CCDC7-216ENST00000640058 ACSM1Q08AH1 577 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCDC7-216ENST00000640058 C3P1Q6ZMU1 363 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 RNF130Q86XS8 419 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 ABCA7Q8IZY2 2146 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 GBP7Q8N8V2 638 aaPredicted RBP3.75□□□□□ -1.81
CCDC7-216ENST00000640058 SUMF1Q8NBK3 374 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 RPLP0P6Q8NHW5 317 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 NEDD4LQ96PU5 975 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 TBC1D13Q9NVG8 400 aa3.75□□□□□ -1.81
CCDC7-216ENST00000640058 KLLNB2CW77 178 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 DIAPH2O60879 1101 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 SERPING1P05155 500 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 OR52Z1P0C646 297 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 OR1D5P58170 312 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 FKBP3Q00688 224 aaKnown RBP3.74□□□□□ -1.81
CCDC7-216ENST00000640058 ZNF146Q15072 292 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 BRINP3Q76B58 766 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 POGLUT1Q8NBL1 392 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 NDNQ99608 321 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 ATF6BQ99941 703 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 RAVER2Q9HCJ3 691 aaKnown RBP3.74□□□□□ -1.81
CCDC7-216ENST00000640058 SWAP70Q9UH65 585 aa3.74□□□□□ -1.81
CCDC7-216ENST00000640058 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 EEF1B2P24534 225 aaKnown RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 KHKP50053 298 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 RBPJQ06330 500 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 ILF2Q12905 390 aaKnown RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 DUSP5Q16690 384 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 FGD3Q5JSP0 725 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 ATP1A1-AS1Q5TC04 95 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 WDR78Q5VTH9 848 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 PLPPR4Q7Z2D5 763 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 TLK2Q86UE8 772 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 POMGNT2Q8NAT1 580 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 SPPL2AQ8TCT8 520 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 CHURC1Q8WUH1 139 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 C1orf147Q96MC9 270 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 SDCBP2Q9H190 292 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 RIMS4Q9H426 269 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 JPT2Q9H910 190 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 XAB2Q9HCS7 855 aaKnown RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 TERF2IPQ9NYB0 399 aa3.73□□□□□ -1.81
CCDC7-216ENST00000640058 ZNF107Q9UII5 783 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-216ENST00000640058 A0A087WZ39 114 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 IGHV3-20A0A0C4DH32 117 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 RPLP0P05388 317 aaKnown RBP3.72□□□□□ -1.81
CCDC7-216ENST00000640058 DUX4L4P0CJ87 422 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 PCP11498 1178 aaKnown RBP3.72□□□□□ -1.81
CCDC7-216ENST00000640058 F3P13726 295 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 MYOGP15173 224 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 SFTPDP35247 375 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 NDST2P52849 883 aa3.72□□□□□ -1.81
CCDC7-216ENST00000640058 NDUFV3P56181 108 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms