RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 FICDQ9BVA6 458 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 REG4Q9BYZ8 158 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ACTL8Q9H568 366 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ARNT2Q9HBZ2 717 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 GLOD4Q9HC38 313 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 C1orf109Q9NX04 203 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 PDP1Q9P0J1 537 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SH3BP4Q9P0V3 963 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 IKZF3Q9UKT9 509 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 MGAT4AQ9UM21 535 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZSWIM8A7E2V4 1837 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 KERAO60938 352 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SIX3O95343 332 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ALDH1A1P00352 501 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 IL1AP01583 271 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 APOC1P02654 83 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 STSP08842 583 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ACSM4P0C7M7 580 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 GABRB1P18505 474 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ITGALP20701 1170 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 GZMMP51124 257 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 TSTQ16762 297 aaKnown RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 KDELC2Q7Z4H8 507 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CILP2Q8IUL8 1156 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 TP53INP2Q8IXH6 220 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SAMD14Q8IZD0 417 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CRYBG2Q8N1P7 616 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 LILRB2Q8N423 598 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SLC37A3Q8NCC5 494 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CLRN3Q8NCR9 226 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 OR4F6Q8NGB9 312 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CREB3L4Q8TEY5 395 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SLC13A3Q8WWT9 602 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ATOH1Q92858 354 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 FAM149B1Q96BN6 582 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SOSTQ9BQB4 213 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CD244Q9BZW8 370 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 MFSD1Q9H3U5 465 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SP110Q9HB58 689 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ADAM30Q9UKF2 790 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 MAB21L2Q9Y586 359 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 FAM240BA0A1B0GVZ2 78 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 F8W036 122 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SGK494L7N484 410 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CHP2O43745 196 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SNAPINO95295 136 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SCG5P05408 212 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 CNPP09543 421 aaKnown RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 TSPAN19P0C672 248 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ODC1P11926 461 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 STAT5BP51692 787 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SF3A2Q15428 464 aaKnown RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 LRFN4Q6PJG9 635 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 KLHL17Q6TDP4 642 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 GPRIN3Q6ZVF9 776 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 NPWQ8N729 165 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 OR2T11Q8NH01 316 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 FOXJ1Q92949 421 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 RIT1Q92963 219 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SLC25A46Q96AG3 418 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 PGAP3Q96FM1 320 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 NSUN5Q96P11 429 aaKnown RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 RBP7Q96R05 134 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 PCYT2Q99447 389 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ZBTB18Q99592 522 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SPOCK3Q9BQ16 436 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 TTPALQ9BTX7 342 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 THUMPD3Q9BV44 507 aaKnown RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 SLC2A6Q9UGQ3 507 aa11.63□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF490Q9ULM2 529 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-221ENST00000638141 PCNTO95613 3336 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 GBF1Q92538 1859 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 A0A1W2PPL8 197 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 LYRM1O43325 122 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 OR56A5P0C7T3 313 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 LHCGRP22888 699 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 EPHA5P54756 1037 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ST3GAL4Q11206 333 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ABRQ12979 859 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 DDI2Q5TDH0 399 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 FAM171A1Q5VUB5 890 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 RTL4Q6ZR62 310 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 HTR3DQ70Z44 454 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM192Q8IY95 271 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 LRRC52Q8N7C0 313 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 C19orf18Q8NEA5 215 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 SRFBP1Q8NEF9 429 aaKnown RBP11.62□□□□□ -0.55
CAPN3-221ENST00000638141 OR8K3Q8NH51 312 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ULK4Q96C45 1275 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms