RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RRM2BQ7LG56 351 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 NLGN4XQ8N0W4 816 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 NAGSQ8N159 534 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 NFKBIDQ8NI38 313 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 PATE1Q8WXA2 126 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 GTF2H4Q92759 462 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 GATA6Q92908 595 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 SIPA1Q96FS4 1042 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 NR1H4Q96RI1 486 aaPredicted RBP7.25□□□□□ -1.25
PKP4-217ENST00000628904 SH3GL1Q99961 368 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 OSBPL11Q9BXB4 747 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 MKRN2Q9H000 416 aaKnown RBP7.25□□□□□ -1.25
PKP4-217ENST00000628904 PAIP1Q9H074 479 aaKnown RBP7.25□□□□□ -1.25
PKP4-217ENST00000628904 TOR3AQ9H497 397 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 KCNK12Q9HB15 430 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 FANCEQ9HB96 536 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 STARD5Q9NSY2 213 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
PKP4-217ENST00000628904 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 FAM227AF5H4B4 570 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 NDUFS4O43181 175 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ERI3O43414 337 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 PRAMEF10O60809 474 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 KLF8O95600 359 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 IMPA1P29218 277 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ATP6V1E1P36543 226 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 HPCAL1P37235 193 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ELP6Q0PNE2 266 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SYT16Q17RD7 645 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 DEFB110Q30KQ9 67 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 GPAT3Q53EU6 434 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 OGFRL1Q5TC84 451 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 FOXB2Q5VYV0 432 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 C16orf87Q6PH81 154 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 FAM83HQ6ZRV2 1179 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 TBC1D21Q8IYX1 336 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ADGRG5Q8IZF4 528 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ZNF540Q8NDQ6 660 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CCL4L1Q8NHW4 92 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ATL1Q8WXF7 558 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SLC9A6Q92581 669 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 TP53INP1Q96A56 240 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 RAD51AP1Q96B01 352 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CXorf40BQ96DE9 158 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 TRAPPC9Q96Q05 1148 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 IL4I1Q96RQ9 567 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SLC35A5Q9BS91 424 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PLA2G2FQ9BZM2 168 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 POPDC3Q9HBV1 291 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ZIM2Q9NZV7 527 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 MAGEL2Q9UJ55 1249 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PCDHGA11Q9Y5H2 935 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PCYT1BQ9Y5K3 369 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 GMPPBQ9Y5P6 360 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CELSR3Q9NYQ7 3312 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 FRS3O43559 492 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 FAM20BO75063 409 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 MOSPD3O75425 235 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 THRBP10828 461 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 GRK3P35626 688 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 P2RY2P41231 377 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ATP1A4Q13733 1029 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 NNATQ16517 81 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CARTPTQ16568 116 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 HNRNPA1L2Q32P51 320 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 C9orf64Q5T6V5 341 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ARMC3Q5W041 872 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 AP1ARQ63HQ0 302 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 KIAA1211LQ6NV74 962 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 XKR5Q6UX68 686 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ZNF783Q6ZMS7 281 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 FAM43BQ6ZT52 329 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 GALNT13Q8IUC8 556 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 C8orf59Q8N0T1 100 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 PIK3C3Q8NEB9 887 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ZFP28Q8NHY6 868 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PRR14Q9BWN1 585 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 EHD1Q9H4M9 534 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CLK4Q9HAZ1 481 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 YBX2Q9Y2T7 364 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 GABRR3A8MPY1 467 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SUV39H1O43463 412 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SLC28A2O43868 658 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PRAMEF4O60810 478 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 VIPP01282 170 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 BCHEP06276 602 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 TFPTP0C1Z6 253 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 NR2F1P10589 423 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PIM1P11309 404 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 TCF3P15923 654 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 TNNI3P19429 210 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 RYKP34925 604 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 MAGEA10P43363 369 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 ST13P50502 369 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 GALK1P51570 392 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PHC1P78364 1004 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms