RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 VEGFDO43915 354 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 PIM1P11309 404 aaPredicted RBP20.77■□□□□ 0.92
SGMS1-210ENST00000619438 GLB1P16278 677 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 GGT5P36269 586 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 HSPA7P48741 367 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 NME5P56597 212 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 BNIP2Q12982 314 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 C18orf21Q32NC0 220 aaPredicted RBP20.77■□□□□ 0.92
SGMS1-210ENST00000619438 MILR1Q7Z6M3 343 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 SFTPA2Q8IWL1 248 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 LILRA2Q8N149 483 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 CDK15Q96Q40 435 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 PCDHAC1Q9H158 963 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 LRIT1Q9P2V4 623 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 OPTCQ9UBM4 332 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 TRPS1Q9UHF7 1281 aa20.77■□□□□ 0.92
SGMS1-210ENST00000619438 CNOT11Q9UKZ1 510 aaKnown RBP20.77■□□□□ 0.92
SGMS1-210ENST00000619438 GPR89AB7ZAQ6 455 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 IFRD1O00458 451 aaPredicted RBP20.77■□□□□ 0.91
SGMS1-210ENST00000619438 NME4O00746 187 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 NOBOXO60393 691 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 STAMBPO95630 424 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 GPR89BP0CG08 455 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 MPC1LP0DKB6 136 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 ACP5P13686 325 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 AOAHP28039 575 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 SLC7A1P30825 629 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 AQP4P55087 323 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 TMEM115Q12893 351 aaPredicted RBP20.77■□□□□ 0.91
SGMS1-210ENST00000619438 GTF2H3Q13889 308 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 LRRC36Q1X8D7 754 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 SLC15A3Q8IY34 581 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 SFRP1Q8N474 314 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 TMEM102Q8N9M5 508 aaPredicted RBP20.77■□□□□ 0.91
SGMS1-210ENST00000619438 ICA1LQ8NDH6 482 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 ATP6V1E2Q96A05 226 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 CCDC74AQ96AQ1 378 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 EGFL8Q99944 293 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 MUC13Q9H3R2 512 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 WWOXQ9NZC7 414 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 SCOCQ9UIL1 159 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 LEF1Q9UJU2 399 aaPredicted RBP20.77■□□□□ 0.91
SGMS1-210ENST00000619438 TMPRSS11EQ9UL52 423 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 CCL27Q9Y4X3 112 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 AP4S1Q9Y587 144 aa20.77■□□□□ 0.91
SGMS1-210ENST00000619438 TRABD2BA6NFA1 517 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 LSM1O15116 133 aaKnown RBP20.76■□□□□ 0.91
SGMS1-210ENST00000619438 C8GP07360 202 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 EBLN1P0CF75 366 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 SLC6A2P23975 617 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 HMOX2P30519 316 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 CCR7P32248 378 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 POLR2JP52435 117 aaKnown RBP20.76■□□□□ 0.91
SGMS1-210ENST00000619438 GRAMD1BQ3KR37 738 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 PLEKHS1Q5SXH7 462 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 TMEM154Q6P9G4 183 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 DHFR2Q86XF0 187 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 TCAIMQ8N3R3 496 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 Q8N9G6 341 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-210ENST00000619438 FNDC5Q8NAU1 212 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 PPP3R2Q96LZ3 170 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 DEPDC7Q96QD5 511 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 KCNK6Q9Y257 313 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 PCDHA9Q9Y5H5 950 aa20.76■□□□□ 0.91
SGMS1-210ENST00000619438 PCYT1BQ9Y5K3 369 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-210ENST00000619438 KNTC1P50748 2209 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 PIKFYVEQ9Y2I7 2098 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 TRBV23OR9-2A0A075B6M9 112 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 ASPDHA6ND91 283 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 AQP12BA6NM10 295 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 RHPN2P1A8MT19 583 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 KPNA5O15131 536 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 AP2A2O94973 939 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 GUCA1CO95843 209 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 ANXA5P08758 320 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 HTR6P50406 440 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 UFM1P61960 85 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 TLR1Q15399 786 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 LDLRAP1Q5SW96 308 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 CRTC3Q6UUV7 619 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 SCIMPQ6UWF3 145 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 LRRTM4Q86VH4 590 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 ZFAND4Q86XD8 727 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 AQP12AQ8IXF9 295 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 WDR48Q8TAF3 677 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 PROKR1Q8TCW9 393 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 NAT14Q8WUY8 206 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 DCUN1D1Q96GG9 259 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 TEX37Q96LM6 180 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 PKP2Q99959 881 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 SLC39A3Q9BRY0 314 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 SLC12A9Q9BXP2 914 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 SLC29A3Q9BZD2 475 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 TRIM15Q9C019 465 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 ZCCHC2Q9C0B9 1178 aaKnown RBP20.75■□□□□ 0.91
SGMS1-210ENST00000619438 COPS7BQ9H9Q2 264 aaPredicted RBP20.75■□□□□ 0.91
SGMS1-210ENST00000619438 ANGPTL3Q9Y5C1 460 aa20.75■□□□□ 0.91
SGMS1-210ENST00000619438 CCDC154A6NI56 674 aa20.74■□□□□ 0.91
SGMS1-210ENST00000619438 H0YJX3 145 aa20.74■□□□□ 0.91
SGMS1-210ENST00000619438 SLC28A1O00337 649 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms