RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ARHGEF17Q96PE2 2063 aaPredicted RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 COL6A3P12111 3177 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 A0A096LPI6 279 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PRSS51A0A1B0GVH4 220 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PRAMEF26H0Y7S4 382 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 H7BY64 318 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SCAMP2O15127 329 aaKnown RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PEX2P28328 305 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ACTR1BP42025 376 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 KIR3DL1P43629 444 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ASMTP46597 345 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 CCR5P51681 352 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 C21orf58P58505 322 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ACTR1AP61163 376 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 CYP4F2P78329 520 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PRKCQQ04759 706 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 MTAPQ13126 283 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 DPY19L1Q2PZI1 675 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ALG11Q2TAA5 492 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 LPCAT4Q643R3 524 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ICE2Q659A1 982 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 LCN8Q6JVE9 175 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SLC30A9Q6PML9 568 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 MSANTD1Q6ZTZ1 278 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ARMCX6Q7L4S7 300 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ABI3BPQ7Z7G0 1075 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 GPR180Q86V85 440 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PTRH1Q86Y79 214 aaKnown RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SPPL2CQ8IUH8 684 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SYNPOQ8N3V7 929 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 OR13H1Q8NG92 308 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 JPH3Q8WXH2 748 aaPredicted RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 NELL1Q92832 810 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ZUFSPQ96AP4 578 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ZNF570Q96NI8 536 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PRAP1Q96NZ9 151 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 GPR174Q9BXC1 333 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 REXO4Q9GZR2 422 aaKnown RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 PAIP1Q9H074 479 aaKnown RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 KCNH6Q9H252 994 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 MUC13Q9H3R2 512 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 COPS7BQ9H9Q2 264 aaPredicted RBP9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SLC6A13Q9NSD5 602 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 ACTR3BQ9P1U1 418 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 LRRC42Q9Y546 428 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 SNX13Q9Y5W8 968 aa9.62□□□□□ -0.87
AL353770.3-201ENST00000616253 TRBV5-3A0A0A0MS03 114 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 FEZF1A0PJY2 475 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 KRBA1A5PL33 1030 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ERN1O75460 977 aaKnown RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 GBAP04062 536 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 NCK1P16333 377 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 CXCR2P25025 360 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 CD6P30203 668 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 HPCAL1P37235 193 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 RABIFP47224 123 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 OR4D2P58180 307 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 CYP4F3Q08477 520 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ZNF763Q0D2J5 394 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 LRRC36Q1X8D7 754 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 LRIF1Q5T3J3 769 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ANKRD26P1Q6NSI1 321 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 GALNT18Q6P9A2 607 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ABRAXAS1Q6UWZ7 409 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 IZUMO2Q6UXV1 221 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 WASH2PQ6VEQ5 465 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ADCK2Q7Z695 626 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 LILRA2Q8N149 483 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 FRMD1Q8N878 549 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ANKRD53Q8N9V6 530 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 DNAJB8Q8NHS0 232 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 WDR48Q8TAF3 677 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 RLN3Q8WXF3 142 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 STARD8Q92502 1023 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 SNX19Q92543 992 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 SLCO4A1Q96BD0 722 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 BIRC7Q96CA5 298 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 INPP5KQ9BT40 448 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 TPSD1Q9BZJ3 242 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 FOXQ1Q9C009 403 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 IKZF5Q9H5V7 419 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 LTB4R2Q9NPC1 389 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 RIMS3Q9UJD0 308 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 MRPS17Q9Y2R5 130 aaKnown RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 AP4S1Q9Y587 144 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 PCDHB14Q9Y5E9 798 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 COLEC10Q9Y6Z7 277 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 ANKDD1BA6NHY2 528 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 RFXANKO14593 260 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 CASQ2O14958 399 aaPredicted RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 GSNP06396 782 aa9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
AL353770.3-201ENST00000616253 HTR1EP28566 365 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms