RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 TMIGD1Q6UXZ0 262 aa13.58□□□□□ -0.24
SSBP2-220ENST00000615665 LGI4Q8N135 537 aa13.58□□□□□ -0.24
SSBP2-220ENST00000615665 IPCEF1Q8WWN9 437 aaPredicted RBP13.58□□□□□ -0.24
SSBP2-220ENST00000615665 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
SSBP2-220ENST00000615665 FBXL8Q96CD0 374 aa13.58□□□□□ -0.24
SSBP2-220ENST00000615665 CCDC3Q9BQI4 270 aa13.58□□□□□ -0.24
SSBP2-220ENST00000615665 M0QX08 132 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 RETP07949 1114 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 BLVRAP53004 296 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CCSAPQ6IQ19 270 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CXorf40BQ96DE9 158 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
SSBP2-220ENST00000615665 P2RY12Q9H244 342 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 HCFC1R1Q9NWW0 138 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 C6orf47O95873 294 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 HLA-FP30511 346 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TIA1P31483 386 aaKnown RBP eCLIP13.57□□□□□ -0.245e-6■□□□□ 8.7
SSBP2-220ENST00000615665 PLA2G16P53816 162 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CDK6Q00534 326 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 FPGSQ05932 587 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 INAQ16352 499 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 PHC3Q8NDX5 983 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TFGQ92734 400 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-220ENST00000615665 SLC2A11Q9BYW1 496 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 LINC00597Q9H2U6 94 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 AMBNQ9NP70 447 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CDC14AQ9UNH5 594 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 NUAK1O60285 661 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TSPAN19P0C672 248 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CD1EP15812 388 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 SDC1P18827 310 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 MEF2AQ02078 507 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-220ENST00000615665 SLC36A3Q495N2 470 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 RUNDC3AQ59EK9 446 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 XKR5Q6UX68 686 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 MSANTD1Q6ZTZ1 278 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 REEP4Q9H6H4 257 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TAC3Q9UHF0 121 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 CAB39Q9Y376 341 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-220ENST00000615665 PCDHB11Q9Y5F2 797 aa13.57□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3DA0A087WVF3 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3IA0A087WXS9 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3EA0A087X179 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3LB9A6J9 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 AP1G1O43747 822 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DNTTP04053 509 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3HP0C7X1 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 PFKLP17858 780 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 ZNF10P21506 573 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DSTNP60981 165 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 RPS7P62081 194 aaKnown RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 GSTM4Q03013 218 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DCST1Q5T197 706 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 C9orf64Q5T6V5 341 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3GQ6DHY5 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3CQ6IPX1 549 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TBC1D3Q8IZP1 549 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 SIX5Q8N196 739 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 ZBED6CLQ96FA7 236 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 C12orf66Q96MD2 445 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DPH2Q9BQC3 489 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TRIM39Q9HCM9 518 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 GPRC5BQ9NZH0 403 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 CFAP20Q9Y6A4 193 aaKnown RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 E7EQ34 232 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TOR1BO14657 336 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 AOAHP28039 575 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 CCR8P51685 355 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 HMBOX1Q6NT76 420 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 FAM92BQ6ZTR7 304 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 OMA1Q96E52 524 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 COX4I2Q96KJ9 171 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 GPATCH1Q9BRR8 931 aaKnown RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 MTG2Q9H4K7 406 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 CLMPQ9H6B4 373 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TRNAU1APQ9NX07 287 aaKnown RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 SPATA7Q9P0W8 599 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 ATP6V1HQ9UI12 483 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DLGAP4Q9Y2H0 992 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 PRKAB1Q9Y478 270 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 DOCK3Q8IZD9 2030 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 FAM155AB1AL88 458 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 AIREO43918 545 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
SSBP2-220ENST00000615665 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
SSBP2-220ENST00000615665 HSD17B2P37059 387 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms