RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 NCOA7Q8NI08 942 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 FAM76AQ8TAV0 307 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 GRAPLQ8TC17 118 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ACMSDQ8TDX5 336 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 DNAJA4Q8WW22 397 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 LPGAT1Q92604 370 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 BCL2L2Q92843 193 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 GTF3C6Q969F1 213 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 TMEM186Q96B77 213 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 MSANTD3Q96H12 275 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 TTC25Q96NG3 672 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZNF558Q96NG5 402 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 DUX3Q96PT4 197 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 SYT17Q9BSW7 474 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 SPZ1Q9BXG8 430 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 IFIH1Q9BYX4 1025 aaKnown RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 CRNKL1Q9BZJ0 848 aaKnown RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZNF350Q9GZX5 532 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 EXO5Q9H790 373 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZNF334Q9HCZ1 680 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 PALMDQ9NP74 551 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 HPS4Q9NQG7 708 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 SMPD3Q9NY59 655 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 SPG21Q9NZD8 308 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 TBC1D7Q9P0N9 293 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 KLHL8Q9P2G9 620 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 TRMT6Q9UJA5 497 aaKnown RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 TINAGQ9UJW2 476 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 GMEB2Q9UKD1 530 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 PRDM4Q9UKN5 801 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ANGPTL2Q9UKU9 493 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 A4GNTQ9UNA3 340 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 SNX7Q9UNH6 387 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ERVK-11Q9UQG0 969 aa2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 ZCCHC6Q5VYS8 1495 aaKnown RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 BRD4O60885 1362 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P24-202ENST00000615653 COL2A1P02458 1487 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 ERICH2A1L162 156 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 MAGEB16A2A368 324 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GOLGA8OA6NCC3 632 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 ASPDHA6ND91 283 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SDR42E2A6NKP2 422 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SPECC1L-ADORA2AF8WAN1 911 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GOLGA8NF8WBI6 632 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 K7ERQ8 282 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 WRBO00258 174 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 MEIS2O14770 477 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 MED7O43513 233 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 TLX2O43763 284 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GPC4O75487 556 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 CRTAPO75718 401 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 RHBDL1O75783 438 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PDE9AO76083 593 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 TOMM70O94826 608 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SLCO2B1O94956 709 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 MOCS3O95396 460 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 OTCP00480 354 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GH1P01241 217 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SERPINB2P05120 415 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 FAM58BPP0C7Q3 252 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 C8orf89P0DMQ9 161 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 VPREB1P12018 145 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GCFC2P16383 781 aaKnown RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 TNNI3P19429 210 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 TRIM21P19474 475 aaKnown RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 EDN2P20800 178 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 CYP2A7P20853 494 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 S1PR1P21453 382 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 ACHEP22303 614 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PON1P27169 355 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 OTX2P32243 289 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SHMT1P34896 483 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 RFC2P35250 354 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 EFNA5P52803 228 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 NAGLUP54802 743 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GALK2Q01415 458 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PPP1R8Q12972 351 aaKnown RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 BNIP1Q12981 228 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 KCNC3Q14003 757 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 HNRNPDQ14103 355 aaKnown RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 KRT31Q15323 416 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 NAB2Q15742 525 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SGCBQ16585 318 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 ASTE1Q2TB18 679 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PCGF3Q3KNV8 242 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SLC36A3Q495N2 470 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 NADK2Q4G0N4 442 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PAPPA-AS1Q5QFB9 102 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 C6orf136Q5SQH8 315 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 GGNBP1Q5YKI7 109 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 KIAA0930Q6ICG6 404 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 JADE1Q6IE81 842 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 RGMBQ6NW40 437 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 C8orf74Q6P047 294 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 C19orf48Q6RUI8 117 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 LCTLQ6UWM7 567 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PACS1Q6VY07 963 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 SEPT14Q6ZU15 432 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 PHLDB2Q86SQ0 1253 aa2.48□□□□□ -2.01
HMGB1P24-202ENST00000615653 NFE4Q86UQ8 179 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms