RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	CDH1	P12830	882 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	IVD	P26440	423 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	GABRB3	P28472	473 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	CASQ1	P31415	396 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	UQCRFS1	P47985	274 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	CSNK1G2	P78368	415 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	MFAP5	Q13361	173 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	ZNF169	Q14929	603 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	HERC3	Q15034	1050 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	STEAP4	Q687X5	459 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	FAM180A	Q6UWF9	173 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	MBOAT1	Q6ZNC8	495 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	RIPOR1	Q6ZS17	1223 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	IGDCC3	Q8IVU1	814 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	ZBED8	Q8IZ13	594 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	DTWD1	Q8N5C7	304 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197		Q8NA96	180 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	FBXO36	Q8NEA4	188 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	OR9A4	Q8NGU2	314 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	ZCCHC10	Q8TBK6	192 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	SSC4D	Q8WTU2	575 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	C8orf44	Q96CB5	159 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	FBXL8	Q96CD0	374 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	TSPAN17	Q96FV3	270 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	TUBB6	Q9BUF5	446 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	SGPP1	Q9BX95	441 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	ABI3	Q9P2A4	366 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	SNX24	Q9Y343	169 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	MRPS2	Q9Y399	296 aa	Known RBP	10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	KCNE2	Q9Y6J6	123 aa		10.4	□□□□□ -0.74
NPIPB4-222	ENST00000614197	SPTB	P11277	2137 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	FAM95C	A0A1B0GW59	222 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	FEZF1	A0PJY2	475 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	BLACE	A4D250	179 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ANKUB1	A6NFN9	424 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	TCP11X1	B4DZS4	312 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	P2RX6	O15547	441 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	NDUFS4	O43181	175 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	FOXS1	O43638	330 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	H2AFY	O75367	372 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	BMP10	O95393	424 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	DDAH2	O95865	285 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	STATH	P02808	62 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	GP1BB	P13224	206 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	IL1RN	P18510	177 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	IL10	P22301	178 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	JAK1	P23458	1154 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	BCL6	P41182	706 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	XCR1	P46094	333 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	AGTR2	P50052	363 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	HNMT	P50135	292 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	MAT1A	Q00266	395 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ACTN3	Q08043	901 aa	Predicted RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PWP1	Q13610	501 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	NR6A1	Q15406	480 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PHKG1	Q16816	387 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PRR30	Q53SZ7	412 aa	Predicted RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ABHD17B	Q5VST6	288 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ATG9B	Q674R7	924 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	TRMT10B	Q6PF06	316 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ABHD13	Q7L211	337 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ADAMTSL2	Q86TH1	951 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	LAPTM4B	Q86VI4	370 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	AMER3	Q8N944	861 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	MFSD9	Q8NBP5	474 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	OR51Q1	Q8NH59	317 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ANKRD7	Q92527	254 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PYCR2	Q96C36	320 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PDLIM5	Q96HC4	596 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PWWP2A	Q96N64	755 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	AIF1L	Q9BQI0	150 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	GPAM	Q9HCL2	828 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ASF1B	Q9NVP2	202 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	HCN3	Q9P1Z3	774 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PTGFRN	Q9P2B2	879 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	CTNNAL1	Q9UBT7	734 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	NOVA2	Q9UNW9	492 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	UTP11	Q9Y3A2	253 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PCDHGA10	Q9Y5H3	936 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	SLC22A7	Q9Y694	548 aa		10.39	□□□□□ -0.75
NPIPB4-222	ENST00000614197	MYO18B	Q8IUG5	2567 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	IGHV1-45	A0A0A0MS14	117 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	TRAV17	A0A0B4J275	112 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	TRBC2	A0A5B9	178 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	SGK494	L7N484	410 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PSMD12	O00232	456 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	EIF3H	O15372	352 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	S100B	P04271	92 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	PRR35	P0CG20	571 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	COX6A1	P12074	109 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	NPPB	P16860	134 aa		10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	ZNF37A	P17032	561 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	HPD	P32754	393 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	TSFM	P43897	325 aa	Known RBP	10.38	□□□□□ -0.75
NPIPB4-222	ENST00000614197	RPL21	P46778	160 aa	Known RBP	10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms