RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 GSDMCQ9BYG8 508 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 DPY30Q9C005 99 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PITHD1Q9GZP4 211 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 XKR8Q9H6D3 395 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PRM3Q9NNZ6 103 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 AASDHPPTQ9NRN7 309 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 CUEDC1Q9NWM3 386 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF624Q9P2J8 865 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ADGRE2Q9UHX3 823 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 RUVBL1Q9Y265 456 aaKnown RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 LRP4O75096 1905 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ABCA7Q8IZY2 2146 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PDE5AO76074 875 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 MYO1DO94832 1006 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 EML2O95834 649 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 NPPAP01160 153 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 LMNAP02545 664 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 IL6P05231 212 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DCNP07585 359 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SHMT2P34897 504 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DPP6P42658 865 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CLNS1AP54105 237 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ACTR3P61158 418 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RPS13P62277 151 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RACK1P63244 317 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRDX1Q06830 199 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 FOXM1Q08050 763 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TLR1Q15399 786 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TIGD2Q4W5G0 525 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SPIN4Q56A73 249 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PIGGQ5H8A4 983 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ICE2Q659A1 982 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRMT9Q6P2P2 845 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 IYDQ6PHW0 289 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 LAYNQ6UX15 382 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TMIGD1Q6UXZ0 262 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SLC36A4Q6YBV0 504 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 IQCHQ86VS3 1027 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PARGQ86W56 976 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 HPS6Q86YV9 775 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PHACTR4Q8IZ21 702 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RNF175Q8N4F7 328 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 MINDY1Q8N5J2 469 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 OR4K1Q8NGD4 311 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 OR2A1Q8NGT9 310 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CHTF18Q8WVB6 975 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ZFPM2Q8WW38 1151 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 LCN9Q8WX39 176 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 LRRC58Q96CX6 371 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 C11orf24Q96F05 449 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SLC45A3Q96JT2 553 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 APOLD1Q96LR9 279 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SLC6A18Q96N87 628 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 GPATCH1Q9BRR8 931 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RHBGQ9H310 441 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CLMPQ9H6B4 373 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 NT5DC2Q9H857 520 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SPAG4Q9NPE6 437 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DMRT3Q9NQL9 472 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ADA2Q9NZK5 511 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 OR6C2Q9NZP2 312 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 MUTYHQ9UIF7 546 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ICKQ9UPZ9 632 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 POMPQ9Y244 141 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DLGAP4Q9Y2H0 992 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 FANCMQ8IYD8 2048 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRAMEF33A0A0G2JMD5 474 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ASPDHA6ND91 283 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 OR5K4A6NMS3 321 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 H7BY64 318 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 K7ESF4 209 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRICKLE3O43900 615 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRMT3O60678 531 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ETHE1O95571 254 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CTSEP14091 401 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SDC1P18827 310 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 XRCC1P18887 633 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ME2P23368 584 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 HRH2P25021 359 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PTX3P26022 381 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PSMB5P28074 263 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CD38P28907 300 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SERPINB1P30740 379 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 YBX1P67809 324 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ABATP80404 500 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 REEP5Q00765 189 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RPL6Q02878 288 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 NFYCQ13952 458 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CEACAM7Q14002 265 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 RBBP5Q15291 538 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TCEA2Q15560 299 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PAGE3Q5JUK9 113 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms