RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 DUSP12Q9UNI6 340 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 ETHE1O95571 254 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 ACSM2AQ08AH3 577 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 LEXMQ3ZCV2 418 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 ACSM2BQ68CK6 577 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 ALG1LQ6GMV1 187 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 C1orf52Q8N6N3 182 aaKnown RBP19.73■□□□□ 0.75
SSBP3-216ENST00000610401 GGHQ92820 318 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 SLC38A4Q969I6 547 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 SPATA17Q96L03 361 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 MS4A12Q9NXJ0 267 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 TRPM5Q9NZQ8 1165 aa19.73■□□□□ 0.75
SSBP3-216ENST00000610401 TMEM202A6NGA9 273 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 WNT9AO14904 365 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 DSCR3O14972 297 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 IGFBP1P08833 259 aaPredicted RBP19.72■□□□□ 0.75
SSBP3-216ENST00000610401 PREPP48147 710 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 PLEKHG6Q3KR16 790 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 ZMAT1Q5H9K5 638 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 FRG2Q64ET8 278 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 FRG2BQ96QU4 278 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 ZDHHC6Q9H6R6 413 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 RIMKLBQ9ULI2 386 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 CASP8AP2Q9UKL3 1982 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 TPST2O60704 377 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 ALOX5P09917 674 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 ITGAMP11215 1152 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 SOAT1P35610 550 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 PRKCZQ05513 592 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 GAB1Q13480 694 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 NAE1Q13564 534 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 TSTQ16762 297 aaKnown RBP19.72■□□□□ 0.75
SSBP3-216ENST00000610401 TRIM60Q495X7 471 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 PRSS48Q7RTY5 328 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 TSPYL5Q86VY4 417 aaPredicted RBP19.72■□□□□ 0.75
SSBP3-216ENST00000610401 CNPPD1Q9BV87 410 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 NUAK2Q9H093 628 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 C11orf16Q9NQ32 467 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 PCDHB7Q9Y5E2 793 aa19.72■□□□□ 0.75
SSBP3-216ENST00000610401 RANBP2P49792 3224 aaKnown RBP19.72■□□□□ 0.75
SSBP3-216ENST00000610401 E7EQ34 232 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 PRKAR2AP13861 404 aaKnown RBP19.71■□□□□ 0.75
SSBP3-216ENST00000610401 RACK1P63244 317 aaKnown RBP19.71■□□□□ 0.75
SSBP3-216ENST00000610401 DUOXA1Q1HG43 343 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 SPOUT1Q5T280 376 aaKnown RBP19.71■□□□□ 0.75
SSBP3-216ENST00000610401 ZNF605Q86T29 641 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 CYP4Z2PQ8N1L4 340 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 NXPE1Q8N323 547 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 USP7Q93009 1102 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 TMEM203Q969S6 136 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 NEDD4LQ96PU5 975 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 FBXO8Q9NRD0 319 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 MARCH5Q9NX47 278 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 SLC45A1Q9Y2W3 748 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 NAALAD2Q9Y3Q0 740 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 AGAP5A6NIR3 686 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 TMEM88BA6NKF7 163 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 GPR162Q16538 588 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 TTLL9Q3SXZ7 439 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 NTMT1Q9BV86 223 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 CEP44Q9C0F1 390 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 GLTPD2A6NH11 291 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 AMD1P17707 334 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 WEE1P30291 646 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 SOX3P41225 446 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 MRPS15P82914 257 aaKnown RBP19.71■□□□□ 0.75
SSBP3-216ENST00000610401 LRIT3Q3SXY7 679 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 INO80DQ53TQ3 878 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-216ENST00000610401 NXNL2Q5VZ03 156 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 CERS6Q6ZMG9 384 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 SZRD1Q7Z422 152 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 SYT17Q9BSW7 474 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 CDADC1Q9BWV3 514 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 OSGIN1Q9UJX0 560 aa19.71■□□□□ 0.75
SSBP3-216ENST00000610401 DICER1Q9UPY3 1922 aaKnown RBP19.7■□□□□ 0.74
SSBP3-216ENST00000610401 MYO15AQ9UKN7 3530 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 LRRTM2O43300 516 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 MAGEA11P43364 429 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 RPS26P62854 115 aaKnown RBP19.7■□□□□ 0.74
SSBP3-216ENST00000610401 B4GALNT1Q00973 533 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 EXOC3L2Q2M3D2 409 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 GDPD3Q7L5L3 318 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 MEX3DQ86XN8 651 aaKnown RBP19.7■□□□□ 0.74
SSBP3-216ENST00000610401 OR10G2Q8NGC3 310 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 PHF10Q8WUB8 498 aaKnown RBP19.7■□□□□ 0.74
SSBP3-216ENST00000610401 SAMD11Q96NU1 681 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 CCM2Q9BSQ5 444 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 MAGIXQ9H6Y5 334 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 TRPS1Q9UHF7 1281 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 TET1Q8NFU7 2136 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 LOC110117498-PIK3R3F6TDL0 507 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 PCDH17O14917 1159 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 NDUFB5O43674 189 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 FHP07954 510 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 ADRA2AP08913 450 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 CD22P20273 847 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 CRYBA2P53672 197 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 DOC2BQ14184 412 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 PROX2Q3B8N5 592 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 CIDECQ96AQ7 238 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms