RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 NPPBP16860 134 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 PGAM1P18669 254 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 DCTP40126 519 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 RGS4P49798 205 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 CDKN2DP55273 166 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 TBPL1P62380 186 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 CSNK1G2P78368 415 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 DHX9Q08211 1270 aaKnown RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 NAE1Q13564 534 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 CRYMQ14894 314 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 PPP1R7Q15435 360 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 ZXDCQ2QGD7 858 aaPredicted RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 MSS51Q4VC12 460 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 ZNF787Q6DD87 383 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 LRRC8EQ6NSJ5 796 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 TMEM214Q6NUQ4 689 aaKnown RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 AGTRAPQ6RW13 159 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 MBOAT1Q6ZNC8 495 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 IGDCC3Q8IVU1 814 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 PALM2Q8IXS6 379 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 SLC35F6Q8N357 371 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 BCORP1Q8N888 145 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 KCT2Q8NC54 265 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 OR51Q1Q8NH59 317 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 METTL21AQ8WXB1 218 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 TAAR6Q96RI8 345 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 SLX1AQ9BQ83 275 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 ATG10Q9H0Y0 220 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 CCDC177Q9NQR7 707 aaPredicted RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 OLAHQ9NV23 265 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 TAS2R13Q9NYV9 303 aa7.21□□□□□ -1.26
CUX1-219ENST00000606749 TRMT6Q9UJA5 497 aaKnown RBP7.21□□□□□ -1.26
CUX1-219ENST00000606749 IGHV3-20A0A0C4DH32 117 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 GOLGA6L10A0A0M3HER8 536 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 FEZF1A0PJY2 475 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SGK494L7N484 410 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CES2O00748 559 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 DNALI1O14645 258 aaPredicted RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 BANF1O75531 89 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 TSPAN12O95859 305 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 F10P00742 488 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CYC1P08574 325 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 MYBL2P10244 700 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CDH1P12830 882 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 IL1RNP18510 177 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CCND1P24385 295 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 IVDP26440 423 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 BCL6P41182 706 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 TDGF1P3P51864 188 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 IL2P60568 153 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 AP2B1P63010 937 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SP140Q13342 867 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 PHKG1Q16816 387 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SPANXN3Q5MJ09 141 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 RBM20Q5T481 1227 aaKnown RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 TEDDM1Q5T9Z0 273 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 ABHD17BQ5VST6 288 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 PLAG1Q6DJT9 500 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CAPN13Q6MZZ7 669 aaPredicted RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 LCTLQ6UWM7 567 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CPEB2Q7Z5Q1 589 aaKnown RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 PCGF5Q86SE9 256 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 GALNT7Q86SF2 657 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SLC26A11Q86WA9 606 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 C17orf64Q86WR6 236 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CNTN4Q8IWV2 1026 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 MYO1HQ8N1T3 1032 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CAMKVQ8NCB2 501 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 ABHD11Q8NFV4 315 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 OR4K1Q8NGD4 311 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 GABPB2Q8TAK5 448 aaPredicted RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 SLC13A3Q8WWT9 602 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SLCO2A1Q92959 643 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 ALKBH8Q96BT7 664 aaKnown RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 LINGO1Q96FE5 620 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 MAGEB10Q96LZ2 347 aaPredicted RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 NAT9Q9BTE0 207 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 TUBB6Q9BUF5 446 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SGPP1Q9BX95 441 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 FAM129AQ9BZQ8 928 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 RNF32Q9H0A6 362 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.2□□□□□ -1.26
CUX1-219ENST00000606749 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 SPTBN1Q01082 2364 aaKnown RBP7.2□□□□□ -1.26
CUX1-219ENST00000606749 CACNA1DQ01668 2161 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 POLEQ07864 2286 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 CRYBG3Q68DQ2 2970 aa7.2□□□□□ -1.26
CUX1-219ENST00000606749 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 CELSR2Q9HCU4 2923 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SCN3AQ9NY46 2000 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 A0A1B0GUH1 482 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 OR5H15A6NDH6 313 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 A8MUI8 341 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ZG16O60844 167 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 DNAJB6O75190 326 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SEC24DO94855 1032 aaPredicted RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 RASAL1O95294 804 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HIST1H2AGP0C0S8 130 aaPredicted RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 HIST1H2ADP20671 130 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms