RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PSAT1Q9Y617 370 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 U3KQ87 197 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMCHD1A6NHR9 2005 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SIP14410 1827 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A0B4J203 849 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPS10-NUDT3A0A1W2PQS6 291 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC182A6NF36 153 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MPTX1A8MV57 137 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 F8W810 466 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 H3BUI4 141 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 BTN3A1O00481 513 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 AP3D1O14617 1153 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SCAMP3O14828 347 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANKRD28O15084 1053 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC16A4O15374 487 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 USP12O75317 370 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IPO13O94829 963 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SCELO95171 688 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 NDUFB10O96000 172 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CALCAP01258 141 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IFNA7P01567 189 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 APOC1P02654 83 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RAF1P04049 648 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRR35P0CG20 571 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC35E2BP0CK96 405 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GAAP10253 952 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC2A4P14672 509 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF250P15622 560 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TCF3P15923 654 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL7RP16871 459 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 LBPP18428 481 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GGT1P19440 569 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPD1P21695 349 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZP3P21754 424 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CBLP22681 906 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HRH2P25021 359 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MGAT1P26572 445 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CALCRP30988 508 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TNFSF8P32971 234 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 LTBRP36941 435 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 DCTP40126 519 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 LIG4P49917 911 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLCN3P51790 818 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CACNB3P54284 484 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPS6P62753 249 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCNA1P78396 465 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TFAMQ00059 246 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PURAQ00577 322 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TSPY1Q01534 308 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ELP6Q0PNE2 266 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRPSAP1Q14558 356 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 IRF3Q14653 427 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 USP10Q14694 798 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SMAD2Q15796 467 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 DPYSL2Q16555 572 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 KYAT1Q16773 422 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CA9Q16790 459 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PPP1R3AQ16821 1122 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZIK1Q3SY52 487 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 TIMM50Q3ZCQ8 353 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GLYR1Q49A26 553 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 PTPN20Q4JDL3 420 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSD17B12Q53GQ0 312 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARMC4Q5T2S8 1044 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR158Q5T848 1215 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATF7IP2Q5U623 682 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNLSQ5VYX0 342 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 KCTD11Q693B1 232 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SHQ1Q6PI26 577 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CORO6Q6QEF8 472 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 FIP1L1Q6UN15 594 aaKnown RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 NPNTQ6UXI9 565 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HSDL2Q6YN16 418 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYHR1Q6ZMK1 362 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RRM2BQ7LG56 351 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CMC1Q7Z7K0 106 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 KRT73Q86Y46 540 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 SYTL1Q8IYJ3 562 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CENPLQ8N0S6 344 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 Q8N1Y9 231 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 C9orf62Q8N4C0 152 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 STX19Q8N4C7 294 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF366Q8N895 744 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDYL2Q8N8U2 506 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 COLGALT1Q8NBJ5 622 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR8J3Q8NGG0 315 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR52H1Q8NGJ2 320 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 Q8TCH9 128 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 HTR3CQ8WXA8 447 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 CENPIQ92674 756 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MYDGFQ969H8 173 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 YIPF5Q969M3 257 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 MARC2Q969Z3 335 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 KIAA1191Q96A73 305 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 C19orf60Q96EN9 201 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 VPS39Q96JC1 886 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF145Q96MT1 663 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 NEDD4LQ96PU5 975 aa3.94□□□□□ -1.78
HMGB1P50-201ENST00000605814 FYTTD1Q96QD9 318 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms