RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CD93Q9NPY3 652 aa13.92□□□□□ -0.18
VRK3-217ENST00000599538 OLAHQ9NV23 265 aa13.92□□□□□ -0.18
VRK3-217ENST00000599538 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
VRK3-217ENST00000599538 TAC3Q9UHF0 121 aa13.92□□□□□ -0.18
VRK3-217ENST00000599538 PRMT3O60678 531 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 GMNNO75496 209 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 MYO1DO94832 1006 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 SERPINA1P01009 418 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 TFAP2AP05549 437 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ATP6V1B1P15313 513 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 CHRNB3Q05901 458 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 RPA4Q13156 261 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 FAM98BQ52LJ0 330 aaKnown RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 SPIN4Q56A73 249 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 OTUD3Q5T2D3 398 aaPredicted RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 ZNF776Q68DI1 518 aaPredicted RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 NUDT18Q6ZVK8 323 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 SATL1Q86VE3 508 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 DCUN1D3Q8IWE4 304 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 PACRGLQ8N7B6 248 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 IL17RCQ8NAC3 791 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 OR5K2Q8NHB8 316 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 DNAJB8Q8NHS0 232 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 TMBIM1Q969X1 311 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ANKRD60Q9BZ19 345 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ZNF696Q9H7X3 374 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 DCAF13Q9NV06 445 aaKnown RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 ZNF639Q9UID6 485 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 KCNK6Q9Y257 313 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 A0A1W2PQF6 199 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 A0A1W2PQU0 124 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 FOXE1O00358 373 aaPredicted RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 PI15O43692 258 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 OR6B1O95007 311 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 SCELO95171 688 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 TBX6O95947 436 aaPredicted RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 EGFP01133 1207 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 KELP23276 732 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 LTBRP36941 435 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 CCR3P51677 355 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 C21orf58P58505 322 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ABHD18Q0P651 414 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 MERTKQ12866 999 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 AGERQ15109 404 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 MLF2Q15773 248 aaPredicted RBP13.91□□□□□ -0.18
VRK3-217ENST00000599538 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 DPY19L1Q2PZI1 675 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 LIN52Q52LA3 116 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ANKRD34AQ69YU3 496 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 GPR155Q7Z3F1 870 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 FAM129CQ86XR2 697 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 HS3ST5Q8IZT8 346 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 MMP21Q8N119 569 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 OR4K1Q8NGD4 311 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.18
VRK3-217ENST00000599538 SLC47A1Q96FL8 570 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 FBXL20Q96IG2 436 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 GDF15Q99988 308 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 ADI1Q9BV57 179 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 OSGEPL1Q9H4B0 414 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 EHD1Q9H4M9 534 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 SH3BP4Q9P0V3 963 aa13.91□□□□□ -0.18
VRK3-217ENST00000599538 HEATR5BQ9P2D3 2071 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 PRAMEF33A0A0G2JMD5 474 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 KMOO15229 486 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 PRSS23O95084 383 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 TNFAIP8O95379 198 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 SNAP29O95721 258 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 ERGP11308 486 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 NTSR1P30989 418 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 IGFALSP35858 605 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 MTHFRP42898 656 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 TNFRSF4P43489 277 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 TRPC1P48995 793 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 GAB1Q13480 694 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 CPTPQ5TA50 214 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 GALNT18Q6P9A2 607 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 MSANTD1Q6ZTZ1 278 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 METTL25Q8N6Q8 603 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 LINC01555Q8NAE3 123 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 REXO5Q96IC2 774 aaKnown RBP13.9□□□□□ -0.18
VRK3-217ENST00000599538 METTL2AQ96IZ6 378 aaKnown RBP13.9□□□□□ -0.18
VRK3-217ENST00000599538 BDH2Q9BUT1 245 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 C1QTNF2Q9BXJ5 285 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 FAM120CQ9NX05 1096 aaKnown RBP13.9□□□□□ -0.18
VRK3-217ENST00000599538 A0A1W2PPV9 198 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 AXIN1O15169 862 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 KCNK5O95279 499 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 CEACAM5P06731 702 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 NUDT7P0C024 238 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 CTHP32929 405 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 RPS9P46781 194 aaKnown RBP13.9□□□□□ -0.18
VRK3-217ENST00000599538 PPP2CBP62714 309 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 PPP2CAP67775 309 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 CYP4F2P78329 520 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 ADRM1Q16186 407 aa13.9□□□□□ -0.18
VRK3-217ENST00000599538 MPEG1Q2M385 716 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms