RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CHRNGP07510 517 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 POLR2CP19387 275 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 PSMB5P28074 263 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 GRNP28799 593 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ALDH4A1P30038 563 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 CMPK1P30085 196 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 LSP1P33241 339 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 DCTP40126 519 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 CAPZBP47756 277 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 GALNT1Q10472 559 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 NAA25Q14CX7 972 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 SF1Q15637 639 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ICE2Q659A1 982 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 GPRIN3Q6ZVF9 776 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 TMPRSS11BQ86T26 416 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 CUZD1Q86UP6 607 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 CRLF3Q8IUI8 442 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 LRRC56Q8IYG6 542 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ADGRF3Q8IZF5 1079 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 LMNTD1Q8N9Z9 388 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 OR6Y1Q8NGX8 325 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 WDR36Q8NI36 951 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 SLC5A11Q8WWX8 675 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 MOCOSQ96EN8 888 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 CHMP6Q96FZ7 201 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 C7orf26Q96N11 449 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 OR4K3Q96R72 315 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 NRTNQ99748 197 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 SHCBP1LQ9BZQ2 653 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ILKAPQ9H0C8 392 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ABCG4Q9H172 646 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 PRM3Q9NNZ6 103 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 MRPS30Q9NP92 439 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 HRASLS2Q9NWW9 162 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ACTR10Q9NZ32 417 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 TUBD1Q9UJT1 453 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 ADAM21Q9UKJ8 722 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 PCDHGA7Q9Y5G6 932 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 TACC2O95359 2948 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 PCNX1Q96RV3 2341 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 A0A1W2PPV9 198 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 CPED1A4D0V7 1026 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 E7EQ34 232 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 BTN3A3O00478 584 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 OR7A17O14581 309 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 HGSO14964 777 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ITM2AO43736 263 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 FKBP9O95302 570 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ESRRBO95718 433 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ENO1P06733 434 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 CDH1P12830 882 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 PNLIPP16233 465 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 TYRP1P17643 537 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 COL8A1P27658 744 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 SLC5A2P31639 672 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 PDX1P52945 283 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 GPLD1P80108 840 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ABATP80404 500 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 OCRLQ01968 901 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 IRF8Q02556 426 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 CHIT1Q13231 466 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 NR1D2Q14995 579 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ZXDCQ2QGD7 858 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 XKR6Q5GH73 641 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 SH2D4BQ5SQS7 431 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 CES4AQ5XG92 561 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 IRGCQ6NXR0 463 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 GUSBP11Q6P575 273 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 EFL1Q7Z2Z2 1120 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 MILR1Q7Z6M3 343 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 SYVN1Q86TM6 617 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 Q8N9G6 341 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 OR52B6Q8NGF0 335 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 IFI44Q8TCB0 444 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 AGR3Q8TD06 166 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 AGAP11Q8TF27 550 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 RSC1A1Q92681 617 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 NEIL2Q969S2 332 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 PTCD3Q96EY7 689 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 ZBTB26Q9HCK0 441 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 SPHK1Q9NYA1 384 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 RAP2CQ9Y3L5 183 aa11.57□□□□□ -0.56
SHKBP1-213ENST00000597325 IGHV1OR21-1A0A087WYE8 117 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 UGDHO60701 494 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 AGFG2O95081 481 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 CLDN9O95484 217 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 CHEK2O96017 543 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 TROVE2P10155 538 aaKnown RBP eCLIP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HGFP14210 728 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 UGT2B7P16662 529 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 NPPBP16860 134 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HRH2P25021 359 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 MPSTP25325 297 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms