RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PCDH17O14917 1159 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 TP73O15350 636 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 COX6A1P12074 109 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 CDH1P12830 882 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 AP1S2P56377 157 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 EEF1A2Q05639 463 aaKnown RBP22.26■■□□□ 1.15
LSM4-204ENST00000594828 MGAT5Q09328 741 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 MRPL49Q13405 166 aaKnown RBP22.26■■□□□ 1.15
LSM4-204ENST00000594828 EIF2S3LQ2VIR3 472 aaKnown RBP22.26■■□□□ 1.15
LSM4-204ENST00000594828 CRB2Q5IJ48 1285 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 ISLR2Q6UXK2 745 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 ZC3H7AQ8IWR0 971 aaKnown RBP22.26■■□□□ 1.15
LSM4-204ENST00000594828 FBXO36Q8NEA4 188 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 TM4SF19Q96DZ7 209 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 LMF1Q96S06 567 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 KRT12Q99456 494 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 MKL2Q9ULH7 1088 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 SNX24Q9Y343 169 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 PCDHGA10Q9Y5H3 936 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 HECTD1Q9ULT8 2610 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 BLACEA4D250 179 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 LCMT2O60294 686 aaKnown RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 BMP10O95393 424 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 NSA2O95478 260 aaKnown RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 BCL6P41182 706 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 SNRPNP63162 240 aaKnown RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 ZXDCQ2QGD7 858 aaPredicted RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 TMEM214Q6NUQ4 689 aaKnown RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 LINC00696Q6ZRV3 163 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 ASPGQ86U10 573 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 SLC13A3Q8WWT9 602 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 ATL1Q8WXF7 558 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 PYCR2Q96C36 320 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 PDLIM5Q96HC4 596 aaKnown RBP22.25■■□□□ 1.15
LSM4-204ENST00000594828 PSMG3-AS1Q96PY0 264 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 FAM129AQ9BZQ8 928 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 LRRC4CQ9HCJ2 640 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 DOCK10Q96BY6 2186 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 COL12A1Q99715 3063 aa22.25■■□□□ 1.15
LSM4-204ENST00000594828 DOPEY2Q9Y3R5 2298 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 IGHV1-45A0A0A0MS14 117 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 A0A1W2PQ72 361 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 NDC80O14777 642 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 KLHL18O94889 574 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 GUCA1CO95843 209 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 ENO2P09104 434 aaPredicted RBP22.24■■□□□ 1.15
LSM4-204ENST00000594828 PRR35P0CG20 571 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 SAT1P21673 171 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 RPL21P46778 160 aaKnown RBP22.24■■□□□ 1.15
LSM4-204ENST00000594828 MFAP5Q13361 173 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 FASTKD3Q14CZ7 662 aaKnown RBP22.24■■□□□ 1.15
LSM4-204ENST00000594828 NR6A1Q15406 480 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 STRA8Q7Z7C7 330 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 SLC26A11Q86WA9 606 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 OR56A3Q8NH54 315 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 PRR7Q8TB68 274 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 CNDP1Q96KN2 507 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 MOCS1Q9NZB8 636 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 NOVA2Q9UNW9 492 aaKnown RBP22.24■■□□□ 1.15
LSM4-204ENST00000594828 PSAT1Q9Y617 370 aa22.24■■□□□ 1.15
LSM4-204ENST00000594828 LOC102723996A0A087X1L8 192 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 E7ESA3 106 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 FANCGO15287 622 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 CBX6O95503 412 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 SERPINA7P05543 415 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 IL1RNP18510 177 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 CCR8P51685 355 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 TMEM205Q6UW68 189 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 TMEM207Q6UWW9 146 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 PRSS41Q7RTY9 318 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 ZC3HC1Q86WB0 502 aaKnown RBP22.23■■□□□ 1.15
LSM4-204ENST00000594828 MFSD9Q8NBP5 474 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 KCT2Q8NC54 265 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 BBOF1Q8ND07 529 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 ABHD11Q8NFV4 315 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 OR51Q1Q8NH59 317 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 METTL21AQ8WXB1 218 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 FBXL8Q96CD0 374 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 ANKHQ9HCJ1 492 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 RIC8BQ9NVN3 520 aa22.23■■□□□ 1.15
LSM4-204ENST00000594828 FAM95CA0A1B0GW59 222 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 SGK494L7N484 410 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 SEMA7AO75326 666 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 JRKO75564 520 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 C8orf89P0DMQ9 161 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 GP1BBP13224 206 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 ZNF37AP17032 561 aaPredicted RBP22.22■■□□□ 1.15
LSM4-204ENST00000594828 MRPS25P82663 173 aaKnown RBP22.22■■□□□ 1.15
LSM4-204ENST00000594828 ZNF169Q14929 603 aaPredicted RBP22.22■■□□□ 1.15
LSM4-204ENST00000594828 TLR1Q15399 786 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 MFSD4BQ5TF39 518 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 SBSNQ6UWP8 590 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 ZBED8Q8IZ13 594 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 NKAPQ8N5F7 415 aaKnown RBP22.22■■□□□ 1.15
LSM4-204ENST00000594828 OR4K1Q8NGD4 311 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 ZCCHC10Q8TBK6 192 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 PSMF1Q92530 271 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 OR4K3Q96R72 315 aa22.22■■□□□ 1.15
LSM4-204ENST00000594828 BARD1Q99728 777 aaKnown RBP22.22■■□□□ 1.15
LSM4-204ENST00000594828 ZNF700Q9H0M5 742 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms