RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RNASET2O00584 256 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 FPGTO14772 594 aa10□□□□□ -0.81
VPS25-203ENST00000589520 TNFRSF10CO14798 259 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PCDH7O60245 1069 aa10□□□□□ -0.81
VPS25-203ENST00000589520 TBX19O60806 448 aa10□□□□□ -0.81
VPS25-203ENST00000589520 SCN2BO60939 215 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ADAM23O75077 832 aa10□□□□□ -0.81
VPS25-203ENST00000589520 TIPRLO75663 272 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CCNDBP1O95273 360 aa10□□□□□ -0.81
VPS25-203ENST00000589520 EGFP01133 1207 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CEACAM5P06731 702 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ABCB1P08183 1280 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 HOXB9P17482 250 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 GPX2P18283 190 aa10□□□□□ -0.81
VPS25-203ENST00000589520 HTR1BP28222 390 aa10□□□□□ -0.81
VPS25-203ENST00000589520 NUDT1P36639 197 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CCT8P50990 548 aa10□□□□□ -0.81
VPS25-203ENST00000589520 RAB28P51157 221 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CHN2P52757 468 aa10□□□□□ -0.81
VPS25-203ENST00000589520 OR4D2P58180 307 aa10□□□□□ -0.81
VPS25-203ENST00000589520 MTPNP58546 118 aa10□□□□□ -0.81
VPS25-203ENST00000589520 YPEL5P62699 121 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PHC1P78364 1004 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ZNF763Q0D2J5 394 aa10□□□□□ -0.81
VPS25-203ENST00000589520 BIRC2Q13490 618 aa10□□□□□ -0.81
VPS25-203ENST00000589520 DDX39BQ13838 428 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 PDK3Q15120 406 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ADRM1Q16186 407 aa10□□□□□ -0.81
VPS25-203ENST00000589520 UGT8Q16880 541 aa10□□□□□ -0.81
VPS25-203ENST00000589520 UAP1L1Q3KQV9 507 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PLA2G4EQ3MJ16 856 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PYCR3Q53H96 274 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CATSPEREQ5SY80 951 aa10□□□□□ -0.81
VPS25-203ENST00000589520 OR4F3Q6IEY1 312 aa10□□□□□ -0.81
VPS25-203ENST00000589520 EP400NLQ6ZTU2 488 aa10□□□□□ -0.81
VPS25-203ENST00000589520 SPRED1Q7Z699 444 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ST13P4Q8IZP2 240 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 DTWD1Q8N5C7 304 aa10□□□□□ -0.81
VPS25-203ENST00000589520 C1orf52Q8N6N3 182 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 TRIML2Q8N7C3 387 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ZNF548Q8NEK5 533 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 OR4K1Q8NGD4 311 aa10□□□□□ -0.81
VPS25-203ENST00000589520 OR5AR1Q8NGP9 310 aa10□□□□□ -0.81
VPS25-203ENST00000589520 GOT1L1Q8NHS2 421 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 SNX19Q92543 992 aa10□□□□□ -0.81
VPS25-203ENST00000589520 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 PANX1Q96RD7 426 aa10□□□□□ -0.81
VPS25-203ENST00000589520 FERD3LQ96RJ6 166 aa10□□□□□ -0.81
VPS25-203ENST00000589520 CPPED1Q9BRF8 314 aaPredicted RBP10□□□□□ -0.81
VPS25-203ENST00000589520 CHID1Q9BWS9 393 aa10□□□□□ -0.81
VPS25-203ENST00000589520 OSBPL10Q9BXB5 764 aa10□□□□□ -0.81
VPS25-203ENST00000589520 REXO4Q9GZR2 422 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 REEP4Q9H6H4 257 aa10□□□□□ -0.81
VPS25-203ENST00000589520 MYNNQ9NPC7 610 aa10□□□□□ -0.81
VPS25-203ENST00000589520 SLC25A37Q9NYZ2 338 aa10□□□□□ -0.81
VPS25-203ENST00000589520 NDUFA13Q9P0J0 144 aa10□□□□□ -0.81
VPS25-203ENST00000589520 SERGEFQ9UGK8 458 aa10□□□□□ -0.81
VPS25-203ENST00000589520 ADAM29Q9UKF5 820 aa10□□□□□ -0.81
VPS25-203ENST00000589520 TDRKHQ9Y2W6 561 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 PCDHB11Q9Y5F2 797 aa10□□□□□ -0.81
VPS25-203ENST00000589520 HS3ST3A1Q9Y663 406 aa10□□□□□ -0.81
VPS25-203ENST00000589520 AP4B1Q9Y6B7 739 aa10□□□□□ -0.81
VPS25-203ENST00000589520 MTCH2Q9Y6C9 303 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PIAS3Q9Y6X2 628 aa10□□□□□ -0.81
VPS25-203ENST00000589520 PRRC2BQ5JSZ5 2229 aaKnown RBP10□□□□□ -0.81
VPS25-203ENST00000589520 ATG2AQ2TAZ0 1938 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 COL4A3Q01955 1670 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 ANKRD12Q6UB98 2062 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 RNF103-CHMP3A0A140T963 221 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 PRR19A6NJB7 356 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 GABRR3A8MPY1 467 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 CLIC1O00299 241 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 TXNDC9O14530 226 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 CLOCKO15516 846 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 SMNDC1O75940 238 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS25-203ENST00000589520 MTHFD1P11586 935 aaKnown RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 PTPN6P29350 595 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 GRK3P35626 688 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 RXRGP48443 463 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 GZMMP51124 257 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 WNT3P56703 355 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 TRA2BP62995 288 aaKnown RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 RAE1P78406 368 aaKnown RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 TXNL4AP83876 142 aaKnown RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 EPS8Q12929 822 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 TSTA3Q13630 321 aaPredicted RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 VEZF1Q14119 521 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 SELPLGQ14242 412 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 FGL2Q14314 439 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 KRT33BQ14525 404 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 PON2Q15165 354 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 DEPDC1Q5TB30 811 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 CPZQ66K79 652 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 HMBOX1Q6NT76 420 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 KIAA1211LQ6NV74 962 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 GCNT7Q6ZNI0 430 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 CHST15Q7LFX5 561 aaPredicted RBP9.99□□□□□ -0.81
VPS25-203ENST00000589520 AMIGO2Q86SJ2 522 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 MSRB3Q8IXL7 192 aa9.99□□□□□ -0.81
VPS25-203ENST00000589520 GALNT4Q8N4A0 578 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms