RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 HDAC8Q9BY41 377 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 ANKRD60Q9BZ19 345 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 DPY30Q9C005 99 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 FAM83DQ9H4H8 585 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 ZDHHC6Q9H6R6 413 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 RMND5AQ9H871 391 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 GORASP2Q9H8Y8 452 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 NANOGQ9H9S0 305 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 LMAN1LQ9HAT1 526 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 CLK4Q9HAZ1 481 aaKnown RBP5.57□□□□□ -1.52
SDF2-206ENST00000587788 IL1RL2Q9HB29 575 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 LRTM1Q9HBL6 345 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 ZDHHC4Q9NPG8 344 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 SPATA6Q9NWH7 488 aaPredicted RBP5.57□□□□□ -1.52
SDF2-206ENST00000587788 C1orf109Q9NX04 203 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 ARL15Q9NXU5 204 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 GIMAP2Q9UG22 337 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 AURKCQ9UQB9 309 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 MYRFQ9Y2G1 1151 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 HIF3AQ9Y2N7 669 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 MRPS17Q9Y2R5 130 aaKnown RBP5.57□□□□□ -1.52
SDF2-206ENST00000587788 CCL27Q9Y4X3 112 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 PTGDR2Q9Y5Y4 395 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 VPS13AQ96RL7 3174 aa5.57□□□□□ -1.52
SDF2-206ENST00000587788 ADAMTS9Q9P2N4 1935 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 MUC6Q6W4X9 2439 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 RNF103-CHMP3A0A140T963 221 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 A0A1B0GTL3 188 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TCRBV5S2A0A599 114 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ASPDHA6ND91 283 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 EIF4E1BA6NMX2 242 aaKnown RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 H0YAE9 185 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 H3BNH8 94 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 GFYI3L273 518 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 K7EQS6 105 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ANKRD28O15084 1053 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 GSTA4O15217 222 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 INPP4BO15327 924 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TSPAN6O43657 245 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ATG13O75143 517 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 SEC22BO75396 215 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TIPRLO75663 272 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 GUCA1CO95843 209 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 HPRP00739 348 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT2B4P06133 528 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 EPHX1P07099 455 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ANXA6P08133 673 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TDGF1P13385 188 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 HSD3B1P14060 373 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT1A6P19224 532 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT1A1P22309 533 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT1A4P22310 534 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 MYF6P23409 242 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ITGB7P26010 798 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 HSD3B2P26439 372 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 COL8A1P27658 744 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TTKP33981 857 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT1A3P35503 534 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UGT1A5P35504 534 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 PLA2G5P39877 138 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CASP2P42575 452 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 SLC6A12P48065 614 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CCT8P50990 548 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ATXN3P54252 364 aaPredicted RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 POLE2P56282 527 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CLDN8P56748 225 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ESRRGP62508 458 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CHRNB3Q05901 458 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 LRRC74AQ0VAA2 488 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 EPS8Q12929 822 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CSTF3Q12996 717 aaKnown RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 APOFQ13790 326 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CAPRIN1Q14444 709 aaKnown RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 STARD3Q14849 445 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 MYBPC3Q14896 1274 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ABRAXAS2Q15018 415 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 MAPKAPK3Q16644 382 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 KCTD21Q4G0X4 260 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 TMEM52BQ4KMG9 183 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ATP13A5Q4VNC0 1218 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 PRRT3Q5FWE3 981 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 NHSL2Q5HYW2 709 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 PAGE3Q5JUK9 113 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 EOGTQ5NDL2 527 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 LDLRAP1Q5SW96 308 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 C6orf52Q5T4I8 152 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 ATG9BQ674R7 924 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 GLYATQ6IB77 296 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 NEK5Q6P3R8 708 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 DLEU7Q6UYE1 221 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 UBE2R2Q712K3 238 aaPredicted RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 C1orf210Q8IVY1 113 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 KLHDC8AQ8IYD2 350 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 KIAA2013Q8IYS2 634 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 CLDN19Q8N6F1 224 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 BEND7Q8N7W2 519 aaPredicted RBP5.56□□□□□ -1.52
SDF2-206ENST00000587788 TSPAN14Q8NG11 270 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 OR6K2Q8NGY2 324 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 DNAJB14Q8TBM8 379 aa5.56□□□□□ -1.52
SDF2-206ENST00000587788 NAT14Q8WUY8 206 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms