RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 LIPCP11150 499 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 CREB1P16220 341 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF28P17035 718 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 VARSP26640 1264 aaKnown RBP18.3■□□□□ 0.52
DDX39A-204ENST00000586558 HNF4AP41235 474 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 GCGRP47871 477 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 DNAJB13P59910 316 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 MEF2AQ02078 507 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ASPHQ12797 758 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 HIST2H2ACQ16777 129 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-204ENST00000586558 FAM214AQ32MH5 1076 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 MANEAQ5SRI9 462 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF678Q5SXM1 525 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 HIST2H2AA3Q6FI13 130 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 RHBDD2Q6NTF9 364 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 TMIGD1Q6UXZ0 262 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 VN1R4Q7Z5H5 301 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZFAND4Q86XD8 727 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ESX1Q8N693 406 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 CAMKVQ8NCB2 501 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF248Q8NDW4 579 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF740Q8NDX6 193 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 TRPV3Q8NET8 790 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 PPP4R1Q8TF05 950 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 MAGEB10Q96LZ2 347 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-204ENST00000586558 TMEM237Q96Q45 408 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 SLC7A5P2Q9GIP4 190 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 SPNS1Q9H2V7 528 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 C12orf65Q9H3J6 166 aaKnown RBP18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ACTR8Q9H981 624 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 OXSMQ9NWU1 459 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 ZFP69BQ9UJL9 534 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 STK38LQ9Y2H1 464 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 PRPF4O43172 522 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■□□□ 14.1
DDX39A-204ENST00000586558 LCMT2O60294 686 aaKnown RBP18.29■□□□□ 0.52
DDX39A-204ENST00000586558 PRAMEF4O60810 478 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 OTCP00480 354 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 NTRK1P04629 796 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 CTSBP07858 339 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 SLC35G6P0C7Q6 338 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 PWP1Q13610 501 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 AGBL2Q5U5Z8 902 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 GARNL3Q5VVW2 1013 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 PRAMEF9Q5VWM5 478 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 LIPJQ5W064 366 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 C6orf15Q6UXA7 325 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-204ENST00000586558 ASPGQ86U10 573 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 DTX1Q86Y01 620 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 NLGN4XQ8N0W4 816 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 NLGN4YQ8NFZ3 816 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-204ENST00000586558 PROKR1Q8TCW9 393 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 ZCCHC14Q8WYQ9 949 aaKnown RBP18.29■□□□□ 0.52
DDX39A-204ENST00000586558 ATP6V1E2Q96A05 226 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 TLCD1Q96CP7 247 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 CLIP3Q96DZ5 547 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 TM4SF19Q96DZ7 209 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 DPH2Q9BQC3 489 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-204ENST00000586558 NTMT1Q9BV86 223 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 SYNPO2LQ9H987 977 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 TXLNGQ9NUQ3 528 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 SLC17A7Q9P2U7 560 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 HEATR5BQ9P2D3 2071 aa18.29■□□□□ 0.52
DDX39A-204ENST00000586558 TLX3O43711 291 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 RAD1O60671 282 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 SUPT7LO94864 414 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ZWINTO95229 277 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 MLYCDO95822 493 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 CD22P20273 847 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 SERPINB1P30740 379 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 CCNG1P51959 295 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 CLCQ05315 142 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 PCLAFQ15004 111 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 RBBP5Q15291 538 aaKnown RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 MUM1Q2TAK8 710 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 UNC50Q53HI1 259 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 PRAMEF17Q5VTA0 474 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 LIPMQ5VYY2 423 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 GRHL2Q6ISB3 625 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ANKRD53Q8N9V6 530 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 L3MBTL4Q8NA19 623 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 GALNT6Q8NCL4 622 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 SLC13A3Q8WWT9 602 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 SREK1Q8WXA9 508 aaKnown RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ZBTB9Q96C00 473 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 NSUN5Q96P11 429 aaKnown RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 DRC3Q9H069 523 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ACBD3Q9H3P7 528 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 NOL11Q9H8H0 719 aaKnown RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 ZBTB26Q9HCK0 441 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 CUTCQ9NTM9 273 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 RUVBL1Q9Y265 456 aaKnown RBP18.28■□□□□ 0.52
DDX39A-204ENST00000586558 AHCTF1Q8WYP5 2266 aa18.28■□□□□ 0.52
DDX39A-204ENST00000586558 APC2O95996 2303 aa18.27■□□□□ 0.52
DDX39A-204ENST00000586558 A0A1B0GX78 115 aa18.27■□□□□ 0.52
DDX39A-204ENST00000586558 HYKKA2RU49 373 aa18.27■□□□□ 0.52
DDX39A-204ENST00000586558 OR7A17O14581 309 aa18.27■□□□□ 0.52
DDX39A-204ENST00000586558 DSCR3O14972 297 aa18.27■□□□□ 0.52
DDX39A-204ENST00000586558 P2RX6O15547 441 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms