RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 BBS2Q9BXC9 721 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 C1orf226A1L170 272 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 KPNA5O15131 536 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 BNIP3LO60238 219 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 NTRK1P04629 796 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 NUDT7P0C024 238 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 EPHB3P54753 998 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ACSM2AQ08AH3 577 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 KCNC3Q14003 757 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ACSM2BQ68CK6 577 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PLEKHG7Q6ZR37 379 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 RHOXF1Q8NHV9 184 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 METTL2AQ96IZ6 378 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 ITPAQ9BY32 194 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 PCDHGB3Q9Y5G1 929 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 AP1M2Q9Y6Q5 423 aa13.71□□□□□ -0.21
CDK5RAP3-237ENST00000585163 OBSL1O75147 1896 aa13.71□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EFCAB9A8MZ26 197 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMEM229AB2RXF0 380 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SCAMP2O15127 329 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SUV39H1O43463 412 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MAGEA10P43363 369 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RAB33AQ14088 237 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FAM124AQ86V42 546 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PLD3Q8IV08 490 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 KIAA1958Q8N8K9 716 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CDC26Q8NHZ8 85 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FCGR1BQ92637 280 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC38A4Q969I6 547 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DSN1Q9H410 356 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 BTNL2Q9UIR0 455 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CXorf51AA0A1B0GTR3 108 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GABRR3A8MPY1 467 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ABCB1P08183 1280 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TGFBR1P36897 503 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DNASE1L3Q13609 305 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RGNQ15493 299 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SF1Q15637 639 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CATSPEREQ5SY80 951 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 C22orf39Q6P5X5 142 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 P3H2Q8IVL5 708 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DOHHQ9BU89 302 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ADPRHL2Q9NX46 363 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 B4GALT6Q9UBX8 382 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SRRDQ9UH36 339 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CD84Q9UIB8 345 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CORO2BQ9UQ03 480 aa13.7□□□□□ -0.22
CDK5RAP3-237ENST00000585163 E7EQ34 232 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 H0YIV9 168 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MTX2O75431 263 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PPIBP23284 216 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RRM2P31350 389 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LIPAP38571 399 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PXNP49023 591 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PPP5CP53041 499 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TUBA1BP68363 451 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DDX39BQ13838 428 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DOC2AQ14183 400 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CPTPQ5TA50 214 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MLIPQ5VWP3 458 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GPR153Q6NV75 609 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TUBA1AQ71U36 451 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CAMKMTQ7Z624 323 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TSEN54Q7Z6J9 526 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 THOC6Q86W42 341 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ASZ1Q8WWH4 475 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ELMO1Q92556 727 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MAL2Q969L2 176 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LMLNQ96KR4 655 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RUBCNLQ9H714 662 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PLCXD1Q9NUJ7 323 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CFAP97Q9P2B7 532 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SGTAO43765 313 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MYO1DO94832 1006 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLCO2B1O94956 709 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ALDH1A1P00352 501 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HSD3B1P14060 373 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HSD3B2P26439 372 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms