RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GGT1P19440 569 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 BUD31P41223 144 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 MAP2K4P45985 399 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ENTPD1P49961 510 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SLC16A1P53985 500 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 FOXM1Q08050 763 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ELP6Q0PNE2 266 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CBLBQ13191 982 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 DCTN2Q13561 401 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF234Q14588 700 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ATP6AP1Q15904 470 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 DUOXA1Q1HG43 343 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 NHSL2Q5HYW2 709 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZDHHC20Q5W0Z9 365 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ALG1LQ6GMV1 187 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 Q6ZNB5 142 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 OLIG3Q7RTU3 272 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF551Q7Z340 670 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 MMP21Q8N119 569 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 NAGSQ8N159 534 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 KRT78Q8N1N4 520 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CLIP4Q8N3C7 705 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ANKFN1Q8N957 763 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZCCHC10Q8TBK6 192 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF480Q8WV37 535 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 UBE2FQ969M7 185 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 TADA1Q96BN2 335 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 REPS1Q96D71 796 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CMTM7Q96FZ5 175 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 VPS35Q96QK1 796 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ACTL8Q9H568 366 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ATAD3AQ9NVI7 634 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SLC25A37Q9NYZ2 338 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF229Q9UJW7 825 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 TMCC3Q9ULS5 477 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 TNFRSF11BO00300 401 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SLC28A2O43868 658 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 RASAL1O95294 804 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SOX14O95416 240 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 VIPP01282 170 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ASLP04424 464 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CTSLP07711 333 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SMIM18P0DKX4 95 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ACADMP11310 421 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 PFKLP17858 780 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 TNNI3P19429 210 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CCNA2P20248 432 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ALDH3A2P51648 485 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 PSMD7P51665 324 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CLDN8P56748 225 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SRSF11Q05519 484 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CSTF3Q12996 717 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF542PQ5EBM4 170 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CHERPQ8IWX8 916 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 WDR48Q8TAF3 677 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 NODALQ96S42 347 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 C17orf62Q9BQA9 187 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 TBC1D23Q9NUY8 699 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ATXN10Q9UBB4 475 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 LOC100130705A0A1B0GUX0 176 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 GSAPA4D1B5 854 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 IL3P08700 152 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 JUPP14923 745 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ACPPP15309 386 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 RPS3P23396 243 aaKnown RBP eCLIP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 PLEKHS1Q5SXH7 462 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 OR2T5Q6IEZ7 315 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 CPXM2Q8N436 756 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 OR2T29Q8NH02 315 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SPPL3Q8TCT6 385 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 APOL4Q9BPW4 351 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 GPATCH1Q9BRR8 931 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 SLC29A3Q9BZD2 475 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 HEBP1Q9NRV9 189 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 FBXL12Q9NXK8 326 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 AHSPQ9NZD4 102 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 DPP7Q9UHL4 492 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ABCG2Q9UNQ0 655 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 GREB1Q4ZG55 1949 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 QSOX1O00391 747 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 SERPINI2O75830 405 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CBSLP0DN79 551 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 KDELR2P33947 212 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CBSP35520 551 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 NUP107P57740 925 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 RAB39AQ14964 217 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 GPAT3Q53EU6 434 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 ARHGAP22Q7Z5H3 698 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 MEX3DQ86XN8 651 aaKnown RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 TMC8Q8IU68 726 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 ZNF557Q8N988 423 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-217ENST00000584582 BRINP2Q9C0B6 783 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 TPK1Q9H3S4 243 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 PPT2Q9UMR5 302 aa10.89□□□□□ -0.67
TOP3A-217ENST00000584582 CA5BQ9Y2D0 317 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms