RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TMEM178AQ8NBL3 297 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 CAMKVQ8NCB2 501 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 M1APQ8TC57 530 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 THAP3Q8WTV1 239 aaPredicted RBP16.93■□□□□ 0.3
MKS1-209ENST00000580127 PRAP1Q96NZ9 151 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 VN1R1Q9GZP7 353 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 ANKHQ9HCJ1 492 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 SYBUQ9NX95 663 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 SH3BGRL2Q9UJC5 107 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 COMMD10Q9Y6G5 202 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 CPAMD8Q8IZJ3 1885 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 HAT1O14929 419 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 SEC24DO94855 1032 aaPredicted RBP16.92■□□□□ 0.3
MKS1-209ENST00000580127 CELA2AP08217 269 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 ARNTP27540 789 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 EEF1DP29692 281 aaKnown RBP16.92■□□□□ 0.3
MKS1-209ENST00000580127 RIPPLY3P57055 190 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 TAS2R50P59544 299 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 SKP1P63208 163 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 ALDH6A1Q02252 535 aaKnown RBP16.92■□□□□ 0.3
MKS1-209ENST00000580127 LRRC8EQ6NSJ5 796 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 PPFIBP2Q8ND30 876 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 OR51Q1Q8NH59 317 aa16.92■□□□□ 0.3
MKS1-209ENST00000580127 A0A0U1RQJ8 604 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 FAM227AF5H4B4 570 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 GFYI3L273 518 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 GRNP28799 593 aaKnown RBP16.91■□□□□ 0.3
MKS1-209ENST00000580127 XCR1P46094 333 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 CLCN7P51798 805 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 MAT1AQ00266 395 aaKnown RBP16.91■□□□□ 0.3
MKS1-209ENST00000580127 DHX34Q14147 1143 aaKnown RBP16.91■□□□□ 0.3
MKS1-209ENST00000580127 UGT3A1Q6NUS8 523 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 H3F3CQ6NXT2 135 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 CENPUQ71F23 418 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 LMNTD2Q8IXW0 634 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 ARHGEF39Q8N4T4 335 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 SLC5A8Q8N695 610 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 PRELID2Q8N945 189 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 GABPB2Q8TAK5 448 aaPredicted RBP16.91■□□□□ 0.3
MKS1-209ENST00000580127 CALML6Q8TD86 181 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 CCDC177Q9NQR7 707 aaPredicted RBP16.91■□□□□ 0.3
MKS1-209ENST00000580127 GALPQ9UBC7 116 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 DHRS7Q9Y394 339 aa16.91■□□□□ 0.3
MKS1-209ENST00000580127 POLQO75417 2590 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 SDR42E2A6NKP2 422 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 EIF3FO00303 357 aaPredicted RBP16.9■□□□□ 0.3
MKS1-209ENST00000580127 SNRPB2P08579 225 aaKnown RBP16.9■□□□□ 0.3
MKS1-209ENST00000580127 CCND1P24385 295 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 SSTR2P30874 369 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 BCL6P41182 706 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
MKS1-209ENST00000580127 NSDHLQ15738 373 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 ZNF470Q6ECI4 717 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 NIPAL1Q6NVV3 410 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
MKS1-209ENST00000580127 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 SPPL2CQ8IUH8 684 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 BEST3Q8N1M1 668 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 TBC1D19Q8N5T2 526 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 LURAP1Q96LR2 239 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 CCDC138Q96M89 665 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 LPAR4Q99677 370 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 SCN3AQ9NY46 2000 aa16.9■□□□□ 0.3
MKS1-209ENST00000580127 FAM237BA0A1B0GVD1 139 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 PABPN1LA6NDY0 278 aaKnown RBP16.89■□□□□ 0.29
MKS1-209ENST00000580127 P2RX6O15547 441 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 FGGP02679 453 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 MLNP12872 115 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 CAPN3P20807 821 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 CD96P40200 585 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 MEF2AQ02078 507 aaPredicted RBP16.89■□□□□ 0.29
MKS1-209ENST00000580127 OC90Q02509 493 aaPredicted RBP16.89■□□□□ 0.29
MKS1-209ENST00000580127 GTF3C1Q12789 2109 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 TUBA3CQ13748 450 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 KCNJ11Q14654 390 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 OR1C1Q15619 314 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 TUBA3EQ6PEY2 450 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 ANKRD37Q7Z713 158 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 C17orf64Q86WR6 236 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 PLD3Q8IV08 490 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 TMEM139Q8IV31 216 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 GPR137Q96N19 417 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 MMP25Q9NPA2 562 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 KLHL1Q9NR64 748 aa16.89■□□□□ 0.29
MKS1-209ENST00000580127 IGHV3-20A0A0C4DH32 117 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 CLDN14O95500 239 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
MKS1-209ENST00000580127 SLC35G6P0C7Q6 338 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 ABOP16442 354 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 POU3F2P20265 443 aaPredicted RBP16.88■□□□□ 0.29
MKS1-209ENST00000580127 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 RGS4P49798 205 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 CUL1Q13616 776 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 HERC3Q15034 1050 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 C3AR1Q16581 482 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 LGI4Q8N135 537 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 PLPP5Q8NEB5 264 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 SLC13A3Q8WWT9 602 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms