RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PRKG2Q13237 762 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ALCAMQ13740 583 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 SNTB1Q13884 538 aaKnown RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 VEZF1Q14119 521 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 TMEM132DQ14C87 1099 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CRY2Q49AN0 593 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ARMC3Q5W041 872 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 PRSS55Q6UWB4 352 aaPredicted RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ANKRD33Q7Z3H0 272 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CPEB2Q7Z5Q1 589 aaKnown RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 HPS6Q86YV9 775 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CCDC60Q8IWA6 550 aaPredicted RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 RCOR2Q8IZ40 523 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 OR8H2Q8N162 312 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 RYBPQ8N488 228 aaPredicted RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 Q8N7P7 452 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 LSMEM1Q8N8F7 131 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CSNK1G2-AS1Q8NCQ2 148 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 Q8NFD4 153 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 OR4D10Q8NGI6 311 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ZPLD1Q8TCW7 415 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 TOMM40LQ969M1 308 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 LURAP1Q96LR2 239 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 EGLN3Q9H6Z9 239 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 DNAJC4Q9NNZ3 241 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 GSN-AS1Q9NRJ2 163 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 GTSE1Q9NYZ3 720 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 IL36AQ9UHA7 158 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 CHORDC1Q9UHD1 332 aaPredicted RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 SLC24A2Q9UI40 661 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 PA2G4Q9UQ80 394 aaKnown RBP1.9□□□□□ -2.11
TOP2A-202ENST00000577541 KAT6BQ8WYB5 2073 aa1.9□□□□□ -2.11
TOP2A-202ENST00000577541 EDDM13A0A1B0GTR0 161 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SYNDIG1LA6NDD5 238 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 K7ENM7 598 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SLC1A7O00341 560 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SNX3O60493 162 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SELEP16581 610 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CYP11B2P19099 503 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 AADACP22760 399 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 ZBTB25P24278 435 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CAPGP40121 348 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 NNMTP40261 264 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 LMAN1P49257 510 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 NDST2P52849 883 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 OPCMLQ14982 345 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 TMEM266Q2M3C6 531 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SUSD4Q5VX71 490 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 RPUSD3Q6P087 351 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF841Q6ZN19 808 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 RBPMS2Q6ZRY4 209 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CDHR3Q6ZTQ4 885 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SLC24A5Q71RS6 500 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SLC22A15Q8IZD6 547 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CCDC89Q8N998 374 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 XXYLT1Q8NBI6 393 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 KLHL5Q96PQ7 755 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 PI4K2AQ9BTU6 479 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CCDC106Q9BWC9 280 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SLC2A11Q9BYW1 496 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 SDCBP2Q9H190 292 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 ST6GALNAC4Q9H4F1 302 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 HEXA-AS1Q9H8Q6 139 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CNOT10Q9H9A5 744 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 RAVER2Q9HCJ3 691 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 GPN1Q9HCN4 374 aaPredicted RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 GPR83Q9NYM4 423 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CPSF2Q9P2I0 782 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 FBXL4Q9UKA2 621 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CPSF3Q9UKF6 684 aaKnown RBP1.89□□□□□ -2.11
TOP2A-202ENST00000577541 CELA1Q9UNI1 258 aa1.89□□□□□ -2.11
TOP2A-202ENST00000577541 TRBV4-1A0A0J9YWV2 114 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 hCG_1809904A0A1W2PP81 198 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 A0A1W2PPE2 198 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 A0A1W2PR64 198 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 NKX6-3A6NJ46 265 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 A8MV72 311 aaPredicted RBP1.88□□□□□ -2.11
TOP2A-202ENST00000577541 F8VVB4 439 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 F8VWA3 439 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 P4HA2O15460 535 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 FIBPO43427 364 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 SPRY1O43609 319 aaPredicted RBP1.88□□□□□ -2.11
TOP2A-202ENST00000577541 TIMM44O43615 452 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 GPRIN2O60269 458 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 PRDM1O75626 825 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 DNTTP04053 509 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 IL11P20809 199 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 EEF1B2P24534 225 aaKnown RBP1.88□□□□□ -2.11
TOP2A-202ENST00000577541 ERVK-16P61578 105 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 FKBP3Q00688 224 aaKnown RBP1.88□□□□□ -2.11
TOP2A-202ENST00000577541 CD300CQ08708 224 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 RASGEF1BQ0VAM2 473 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF146Q15072 292 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 C3AR1Q16581 482 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 UPP1Q16831 310 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 DET1Q7L5Y6 550 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 CHMP1BQ7LBR1 199 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 CENPVQ7Z7K6 275 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms