RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PTGR2Q8N8N7 351 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ANKS4BQ8N8V4 417 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 SNX31Q8N9S9 440 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PDPRQ8NCN5 879 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ZCCHC10Q8TBK6 192 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CT55Q8WUE5 264 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 KCNE4Q8WWG9 221 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 FGF11Q92914 225 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 NKD1Q969G9 470 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PHF21BQ96EK2 531 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 TCTN2Q96GX1 697 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 SCYL1Q96KG9 808 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 C10orf90Q96M02 699 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF578Q96N58 590 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PLCD4Q9BRC7 762 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 FBXO8Q9NRD0 319 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 AKAP7Q9P0M2 348 aaPredicted RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 IL17BQ9UHF5 180 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 DCDC2Q9UHG0 476 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CROTQ9UKG9 612 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 TLK1Q9UKI8 766 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 RARRES3Q9UL19 164 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 RUVBL1Q9Y265 456 aaKnown RBP7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PCDHGA7Q9Y5G6 932 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 PCDHGA3Q9Y5H0 932 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 CHD6Q8TD26 2715 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 SCN2AQ99250 2005 aa7.56□□□□□ -1.2
CCDC40-215ENST00000576033 NUP210LQ5VU65 1888 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 URB1O60287 2271 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 STMND1H3BQB6 276 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 MASP2O00187 686 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 PPP6CO00743 305 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 TERTO14746 1132 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ZSCAN9O15535 394 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 KDM1AO60341 852 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CCNT2O60583 730 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 DNAJB6O75190 326 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SNNO75324 88 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SH3BGRLO75368 114 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 OR2B3O76000 313 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 TGDSO95455 350 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 BPGMP07738 259 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 VIMP08670 466 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ANXA5P08758 320 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 FURINP09958 794 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 HIST1H2AGP0C0S8 130 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 LIPCP11150 499 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 COL6A2P12110 1019 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 HIST1H2ADP20671 130 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 EEF1DP29692 281 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 RORAP35398 523 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 PIK3CGP48736 1102 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 EFNA3P52797 238 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ITGA1P56199 1179 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 AP1S2P56377 157 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 RAB15P59190 212 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ERVPABLB-1P60509 514 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 FOXK2Q01167 660 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 OCRLQ01968 901 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ACY1Q03154 408 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SLBPQ14493 270 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SYT16Q17RD7 645 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 COL28A1Q2UY09 1125 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 GLIPR1L2Q4G1C9 344 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 WASHC2DQ5SRD0 308 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CES4AQ5XG92 561 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF385CQ66K41 422 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CAPN13Q6MZZ7 669 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 FAM198BQ6UWH4 519 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 LCTLQ6UWM7 567 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SHISA6Q6ZSJ9 500 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 COX15Q7KZN9 410 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SPATA21Q7Z572 469 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 VN1R5Q7Z5H4 357 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 C17orf64Q86WR6 236 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ARHGEF39Q8N4T4 335 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ANKRD53Q8N9V6 530 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CCDC197Q8NCU1 140 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF248Q8NDW4 579 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 LRRC8CQ8TDW0 803 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SLC5A11Q8WWX8 675 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 HIST1H2AHQ96KK5 128 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 C7orf26Q96N11 449 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CDK15Q96Q40 435 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 OR2A5Q96R48 311 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 HIST1H2AJQ99878 128 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ELAC2Q9BQ52 826 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 H2AFJQ9BTM1 129 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 RBCK1Q9BYM8 510 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 CHST8Q9H2A9 424 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 ACTR5Q9H9F9 607 aaPredicted RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 NMRAL1Q9HBL8 299 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SLCO1B3Q9NPD5 702 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 SLC22A11Q9NSA0 550 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 NUDT4Q9NZJ9 180 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 DKK4Q9UBT3 224 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms