RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PAQR3Q6TCH7 311 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 RIPOR1Q6ZS17 1223 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 PRSS41Q7RTY9 318 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 VN1R4Q7Z5H5 301 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 C17orf64Q86WR6 236 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 ZCCHC10Q8TBK6 192 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 METTL21AQ8WXB1 218 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 PSMF1Q92530 271 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 LINGO1Q96FE5 620 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 PARVBQ9HBI1 364 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 HCN3Q9P1Z3 774 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 SNX12Q9UMY4 172 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 SH2B3Q9UQQ2 575 aa20.02■□□□□ 0.8
CHRNB1-206ENST00000574054 DIDO1Q9BTC0 2240 aaKnown RBP20.02■□□□□ 0.79
CHRNB1-206ENST00000574054 LOC102723996A0A087X1L8 192 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 DNALI1O14645 258 aaPredicted RBP20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 TTC4O95801 387 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 ITGAMP11215 1152 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 IL1RNP18510 177 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 CSNK1G2P78368 415 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 SP140Q13342 867 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 NAE1Q13564 534 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 BBS9Q3SYG4 887 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 SPANXN3Q5MJ09 141 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 AGTRAPQ6RW13 159 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 BCORP1Q8N888 145 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 VN1R1Q9GZP7 353 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 DDX47Q9H0S4 455 aaKnown RBP20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 PPANQ9NQ55 473 aaKnown RBP20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 OLAHQ9NV23 265 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 SLC17A6Q9P2U8 582 aa20.01■□□□□ 0.79
CHRNB1-206ENST00000574054 TRAV17A0A0B4J275 112 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 FEZF1A0PJY2 475 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 PABPN1LA6NDY0 278 aaKnown RBP20■□□□□ 0.79
CHRNB1-206ENST00000574054 H0YIG0 161 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 NSA2O95478 260 aaKnown RBP20■□□□□ 0.79
CHRNB1-206ENST00000574054 CDH1P12830 882 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 GABRB3P28472 473 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 BCL6P41182 706 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 TNFSF10P50591 281 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 EFNA3P52797 238 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 AP2B1P63010 937 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 MSS51Q4VC12 460 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 ZNF787Q6DD87 383 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 TMEM205Q6UW68 189 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 AMER2Q8N7J2 671 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 CAMKVQ8NCB2 501 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 THAP11Q96EK4 314 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 NAT9Q9BTE0 207 aa20■□□□□ 0.79
CHRNB1-206ENST00000574054 MYO9AB2RTY4 2548 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 KCNE1BA0A087WTH5 132 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 SGK494L7N484 410 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 SLC16A5O15375 505 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 LRRTM2O43300 516 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 ZSCAN12O43309 604 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 AHSGP02765 367 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 HIST1H2AGP0C0S8 130 aaPredicted RBP19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 ICAM2P13598 275 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 HIST1H2ADP20671 130 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 CCND1P24385 295 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 GRK3P35626 688 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 XCR1P46094 333 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 PHKG1Q16816 387 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 HP1BP3Q5SSJ5 553 aaPredicted RBP19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 TMEM214Q6NUQ4 689 aaKnown RBP19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 RPUSD3Q6P087 351 aaKnown RBP19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 KIAA0408Q6ZU52 694 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 LANCL3Q6ZV70 420 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 PCGF5Q86SE9 256 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 SHISA5Q8N114 240 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 GPATCH11Q8N954 259 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 OR51Q1Q8NH59 317 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 CFAP36Q96G28 342 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 HIST1H2AHQ96KK5 128 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 HIST1H2AJQ99878 128 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 H2AFJQ9BTM1 129 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 TUBB6Q9BUF5 446 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 ANKHQ9HCJ1 492 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 TRMT1Q9NXH9 659 aaKnown RBP19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 ZGRF1Q86YA3 2104 aa19.99■□□□□ 0.79
CHRNB1-206ENST00000574054 IGHV3-20A0A0C4DH32 117 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 CES2O00748 559 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 SEC24DO94855 1032 aaPredicted RBP19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 WDPCPO95876 746 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 PER3P56645 1201 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 IL2P60568 153 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 PDAP1Q13442 181 aaKnown RBP19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 ABHD17BQ5VST6 288 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 HIBCHQ6NVY1 386 aaPredicted RBP19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 CPEB2Q7Z5Q1 589 aaKnown RBP19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 ASPGQ86U10 573 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 IGDCC3Q8IVU1 814 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 CNTN4Q8IWV2 1026 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 KCT2Q8NC54 265 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 SLC13A3Q8WWT9 602 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 HAS2Q92819 552 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 CERS2Q96G23 380 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 CYTH2Q99418 400 aa19.98■□□□□ 0.79
CHRNB1-206ENST00000574054 SLX1AQ9BQ83 275 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms