RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 HKDC1Q2TB90 917 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 FBXO48Q5FWF7 155 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 FAM198BQ6UWH4 519 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 SLCO4C1Q6ZQN7 724 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 LRRC70Q7Z2Q7 622 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 VN1R4Q7Z5H5 301 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 SYVN1Q86TM6 617 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 ENDOVQ8N8Q3 282 aaKnown RBP15.42■□□□□ 0.06
LITAF-210ENST00000571976 SNX31Q8N9S9 440 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 ACMSDQ8TDX5 336 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 UBTD2Q8WUN7 234 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 ESAMQ96AP7 390 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 TM4SF19Q96DZ7 209 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 SCYL1Q96KG9 808 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 C10orf90Q96M02 699 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 RUFY1Q96T51 708 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 RAB21Q9UL25 225 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 CDC14AQ9UNH5 594 aa15.42■□□□□ 0.06
LITAF-210ENST00000571976 SEC16AO15027 2179 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 MDC1Q14676 2089 aaKnown RBP15.41■□□□□ 0.06
LITAF-210ENST00000571976 K7EPI3 171 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 NUDT17P0C025 328 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 SLC35G6P0C7Q6 338 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 SCTRP47872 440 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ALDH18A1P54886 795 aaKnown RBP15.41■□□□□ 0.06
LITAF-210ENST00000571976 CYP4F2P78329 520 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 REEP5Q00765 189 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 MEF2AQ02078 507 aaPredicted RBP15.41■□□□□ 0.06
LITAF-210ENST00000571976 COL9A2Q14055 689 aaPredicted RBP15.41■□□□□ 0.06
LITAF-210ENST00000571976 SETDB1Q15047 1291 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 NDUFA9Q16795 377 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 PFKFB4Q16877 469 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 MLIPQ5VWP3 458 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ATG9BQ674R7 924 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 OVCH1Q7RTY7 1134 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ASPGQ86U10 573 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ARHGEF39Q8N4T4 335 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ZNF740Q8NDX6 193 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 MZB1Q8WU39 189 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 SLC13A3Q8WWT9 602 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 CATSPER2Q96P56 530 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 MRPL57Q9BQC6 102 aaKnown RBP15.41■□□□□ 0.06
LITAF-210ENST00000571976 EHD1Q9H4M9 534 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 ZNF304Q9HCX3 659 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 OPTCQ9UBM4 332 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 TCFL5Q9UL49 500 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 TMCO1Q9UM00 188 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 PADI2Q9Y2J8 665 aa15.41■□□□□ 0.06
LITAF-210ENST00000571976 NBEAQ8NFP9 2946 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 P2RX6O15547 441 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 CDH16O75309 829 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 MED26O95402 600 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 ALBP02768 609 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 PRKAR1AP10644 381 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 ITGAXP20702 1163 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 VARSP26640 1264 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 AHRP35869 848 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 SLCO1A2P46721 670 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 AGTR2P50052 363 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 RPS18P62269 152 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 RHDQ02161 417 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 CDC20Q12834 499 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 PWP1Q13610 501 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 FAM53BQ14153 422 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 ERV3-1Q14264 604 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 SLC9A5Q14940 896 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 MRPL14Q6P1L8 145 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 METTL2BQ6P1Q9 378 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 C16orf46Q6P387 395 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 KRT78Q8N1N4 520 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 FKBP10Q96AY3 582 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 PITHD1Q9GZP4 211 aaPredicted RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 MRPL46Q9H2W6 279 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 SLC22A11Q9NSA0 550 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 CPSF2Q9P2I0 782 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 XPR1Q9UBH6 696 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 ZFP69BQ9UJL9 534 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 ASB1Q9Y576 335 aa15.4■□□□□ 0.06
LITAF-210ENST00000571976 TNPO3Q9Y5L0 923 aaKnown RBP15.4■□□□□ 0.06
LITAF-210ENST00000571976 LOC400499M0QZD8 3231 aa15.39■□□□□ 0.06
LITAF-210ENST00000571976 MGAQ8IWI9 3026 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 SMIM23A6NLE4 172 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 PRPF4O43172 522 aaKnown RBP eCLIP15.39■□□□□ 0.05
LITAF-210ENST00000571976 SMIM24O75264 130 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 ITGB2P05107 769 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 GSTA1P08263 222 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 EPB42P16452 691 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 KRT15P19012 456 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 GSTM2P28161 218 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 OR1D4P47884 311 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 NFKB2Q00653 900 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 IFFO1Q0D2I5 559 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 NAA30Q147X3 362 aaPredicted RBP15.39■□□□□ 0.05
LITAF-210ENST00000571976 RBBP5Q15291 538 aaKnown RBP15.39■□□□□ 0.05
LITAF-210ENST00000571976 PCBP2Q15366 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
LITAF-210ENST00000571976 XKR6Q5GH73 641 aa15.39■□□□□ 0.05
LITAF-210ENST00000571976 TMEM214Q6NUQ4 689 aaKnown RBP15.39■□□□□ 0.05
LITAF-210ENST00000571976 TMIGD1Q6UXZ0 262 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms