RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SELENOMQ8WWX9 145 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 CEP19Q96LK0 163 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 MCCC1Q96RQ3 725 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-215ENST00000566843 FEVQ99581 238 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 TMEM246Q9BRR3 403 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 SMURF1Q9HCE7 757 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
COMMD4-215ENST00000566843 SERTM1A2A2V5 107 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 TMEM229AB2RXF0 380 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 SLC25A14O95258 325 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 VEGFBP49765 207 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 NUDT6P53370 316 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 CDH4P55283 916 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 CPSF6Q16630 551 aaKnown RBP eCLIP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 HKDC1Q2TB90 917 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 FAM209AQ5JX71 171 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 ERAP2Q6P179 960 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 SERPINA9Q86WD7 417 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 ZBTB2Q8N680 514 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 EID2BQ96D98 161 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 EGLN2Q96KS0 407 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 CHST8Q9H2A9 424 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 TMEM184CQ9NVA4 438 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 DKK3Q9UBP4 350 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 POFUT2Q9Y2G5 429 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 PRSS21Q9Y6M0 314 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 MAGEB17A8MXT2 336 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 SCAMP3O14828 347 aaKnown RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 TSPAN3O60637 253 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 PRMT3O60678 531 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 LRATO95237 230 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 MZF1P28698 734 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 PRIM2P49643 509 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 GNG2P59768 71 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 SRSF11Q05519 484 aaKnown RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 CSTF3Q12996 717 aaKnown RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 CDKL4Q5MAI5 379 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 NCEH1Q6PIU2 408 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 RBFAQ8N0V3 343 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 OR8H2Q8N162 312 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 OR4C15Q8NGM1 316 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 APIPQ96GX9 242 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 PANX1Q96RD7 426 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 PHOX2BQ99453 314 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 KCNS3Q9BQ31 491 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 DPH2Q9BQC3 489 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-215ENST00000566843 TAPBPLQ9BX59 468 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 DYRK4Q9NR20 520 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
COMMD4-215ENST00000566843 SLC35F4A4IF30 521 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 A8MVJ9 347 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TNFRSF11BO00300 401 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 COL6A1P12109 1028 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ANXA8P13928 327 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 AMD1P17707 334 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 PRPS1L1P21108 318 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 PTX3P26022 381 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 GALK2Q01415 458 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 MGAT3Q09327 533 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 DSC3Q14574 896 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 UGT8Q16880 541 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TBRG1Q3YBR2 411 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 YIF1BQ5BJH7 314 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 SDR16C5Q8N3Y7 309 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 SLC5A8Q8N695 610 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ELMO1Q92556 727 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TPD52L3Q96J77 140 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TRNT1Q96Q11 434 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 BOCQ9BWV1 1114 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 SLC32A1Q9H598 525 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 CFAP20Q9Y6A4 193 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ZFP37Q9Y6Q3 630 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 V9GYH0 126 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 A0A0U1RQF3 1178 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 MEIOCA2RUB1 952 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 SUV39H1O43463 412 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ACSL4O60488 711 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 CTSHP09668 335 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 CYP2A7P20853 494 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 HMGCLP35914 325 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 KCNQ1P51787 676 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 PURAQ00577 322 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TAF10Q12962 218 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 PPIGQ13427 754 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■■□ 25.8
COMMD4-215ENST00000566843 TSTQ16762 297 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 CCDC58Q4VC31 144 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ZNF621Q6ZSS3 439 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 TTC16Q8NEE8 873 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 OR10G2Q8NGC3 310 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 B3GALT6Q96L58 329 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 WDFY2Q96P53 400 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 MGLLQ99685 303 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 AP5M1Q9H0R1 490 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 RUBCNLQ9H714 662 aa15.14■□□□□ 0.01
COMMD4-215ENST00000566843 FAM120CQ9NX05 1096 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 CNOT2Q9NZN8 540 aaKnown RBP15.14■□□□□ 0.01
COMMD4-215ENST00000566843 ZNF451Q9Y4E5 1061 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms