RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 AHRP35869 848 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 CCT5P48643 541 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 PIK3CGP48736 1102 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 MEF2AQ02078 507 aaPredicted RBP24.93■■□□□ 1.58
NME3-209ENST00000566600 ZNF385CQ66K41 422 aaPredicted RBP24.93■■□□□ 1.58
NME3-209ENST00000566600 ASPGQ86U10 573 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 KRT78Q8N1N4 520 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 PTGR2Q8N8N7 351 aaPredicted RBP24.93■■□□□ 1.58
NME3-209ENST00000566600 CHST8Q9H2A9 424 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 RRAGDQ9NQL2 400 aaPredicted RBP24.93■■□□□ 1.58
NME3-209ENST00000566600 TMEM216Q9P0N5 145 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 RUVBL1Q9Y265 456 aaKnown RBP24.93■■□□□ 1.58
NME3-209ENST00000566600 PKD1L2Q7Z442 2459 aa24.93■■□□□ 1.58
NME3-209ENST00000566600 LCMT2O60294 686 aaKnown RBP24.92■■□□□ 1.58
NME3-209ENST00000566600 CD63P08962 238 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 SLC35G6P0C7Q6 338 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 SCTRP47872 440 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 RPS15P62841 145 aaKnown RBP24.92■■□□□ 1.58
NME3-209ENST00000566600 LAPTM5Q13571 262 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 DNASE1L3Q13609 305 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 NDUFA9Q16795 377 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 HKDC1Q2TB90 917 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 XKR6Q5GH73 641 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 C1orf189Q5VU69 101 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 FAM199XQ6PEV8 388 aaPredicted RBP24.92■■□□□ 1.58
NME3-209ENST00000566600 SH2D5Q6ZV89 423 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 VN1R4Q7Z5H5 301 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 SLC13A3Q8WWT9 602 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 TM4SF19Q96DZ7 209 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 WDR34Q96EX3 536 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 PTCD3Q96EY7 689 aaKnown RBP24.92■■□□□ 1.58
NME3-209ENST00000566600 SLC45A3Q96JT2 553 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 EFCAB11Q9BUY7 163 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 SYNPO2LQ9H987 977 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 AKIRIN1Q9H9L7 192 aaPredicted RBP24.92■■□□□ 1.58
NME3-209ENST00000566600 ZFP69BQ9UJL9 534 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 CDC14AQ9UNH5 594 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 ASB1Q9Y576 335 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 PCDHGA6Q9Y5G7 932 aa24.92■■□□□ 1.58
NME3-209ENST00000566600 DSPP15924 2871 aaKnown RBP24.91■■□□□ 1.58
NME3-209ENST00000566600 TERTO14746 1132 aaKnown RBP24.91■■□□□ 1.58
NME3-209ENST00000566600 EFSO43281 561 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 KATNA1O75449 491 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 RAB40ALP0C0E4 278 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 VARSP26640 1264 aaKnown RBP24.91■■□□□ 1.58
NME3-209ENST00000566600 IRF8Q02556 426 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 PCDH1Q08174 1060 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 VAC14Q08AM6 782 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 PWP1Q13610 501 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 TBCCQ15814 346 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 NKAIN1Q4KMZ8 207 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 PAGE2BQ5JRK9 111 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 PRMT9Q6P2P2 845 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 CROCCP2Q86T23 111 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 TMEM151AQ8N4L1 468 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 TEX9Q8N6V9 391 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 ZNF740Q8NDX6 193 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 TTLQ8NG68 377 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 PHF21BQ96EK2 531 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 MVB12AQ96EY5 273 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 SEC16BQ96JE7 1060 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 NT5DC2Q9H857 520 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 GEMIN8Q9NWZ8 242 aaKnown RBP24.91■■□□□ 1.58
NME3-209ENST00000566600 GPN3Q9UHW5 284 aaPredicted RBP24.91■■□□□ 1.58
NME3-209ENST00000566600 GRID1Q9ULK0 1009 aa24.91■■□□□ 1.58
NME3-209ENST00000566600 COPEO14579 308 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 P2RX6O15547 441 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 ONECUT2O95948 504 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 KRT4P19013 534 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 GSTM2P28161 218 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 CRHR1P34998 444 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 CASP2P42575 452 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 MC1RQ01726 317 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 CHIT1Q13231 466 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 SRSF6Q13247 344 aaKnown RBP24.9■■□□□ 1.58
NME3-209ENST00000566600 SLBPQ14493 270 aaKnown RBP eCLIP24.9■■□□□ 1.58
NME3-209ENST00000566600 RBBP5Q15291 538 aaKnown RBP24.9■■□□□ 1.58
NME3-209ENST00000566600 HIST2H2ACQ16777 129 aaPredicted RBP24.9■■□□□ 1.58
NME3-209ENST00000566600 HIST2H2AA3Q6FI13 130 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 TMIGD1Q6UXZ0 262 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 TRPV3Q8NET8 790 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 C10orf90Q96M02 699 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 SPNS1Q9H2V7 528 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 CPNE5Q9HCH3 593 aa24.9■■□□□ 1.58
NME3-209ENST00000566600 SEC16AO15027 2179 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 FOXO6A8MYZ6 492 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 K7ENP7 123 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 PRPF4O43172 522 aaKnown RBP eCLIP24.89■■□□□ 1.586e-8■□□□□ 8.9
NME3-209ENST00000566600 SBK3P0C264 359 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 EEF1DP29692 281 aaKnown RBP24.89■■□□□ 1.58
NME3-209ENST00000566600 CXADRP78310 365 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 SLC18A2Q05940 514 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 RGS1Q08116 209 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 GTF2H2Q13888 395 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 FAM53BQ14153 422 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 DOC2AQ14183 400 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 KRT71Q3SY84 523 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 GTF2H2CQ6P1K8 395 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 C16orf46Q6P387 395 aa24.89■■□□□ 1.58
NME3-209ENST00000566600 INO80CQ6PI98 192 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms