RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PTGFRNQ9P2B2 879 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 MKL2Q9ULH7 1088 aa17.36■□□□□ 0.37
USB1-213ENST00000566292 DIDO1Q9BTC0 2240 aaKnown RBP17.36■□□□□ 0.37
USB1-213ENST00000566292 FEZF1A0PJY2 475 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 BMP10O95393 424 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 NSA2O95478 260 aaKnown RBP17.35■□□□□ 0.37
USB1-213ENST00000566292 TSPAN12O95859 305 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 SERPINA7P05543 415 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 AVPR1BP47901 424 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 SP140Q13342 867 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 NAE1Q13564 534 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 ZXDCQ2QGD7 858 aaPredicted RBP17.35■□□□□ 0.37
USB1-213ENST00000566292 KIAA0408Q6ZU52 694 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 PCGF5Q86SE9 256 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 C17orf64Q86WR6 236 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 MYO1HQ8N1T3 1032 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 SIRT6Q8N6T7 355 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 LINGO1Q96FE5 620 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 PWWP2AQ96N64 755 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 WDR83Q9BRX9 315 aaKnown RBP17.35■□□□□ 0.37
USB1-213ENST00000566292 NAT9Q9BTE0 207 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 SGPP1Q9BX95 441 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 ZNF700Q9H0M5 742 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 RIC8BQ9NVN3 520 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 PLA2G3Q9NZ20 509 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 SLC5A6Q9Y289 635 aa17.35■□□□□ 0.37
USB1-213ENST00000566292 H0YIG0 161 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 PCDH17O14917 1159 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 SLC16A5O15375 505 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 LCMT2O60294 686 aaKnown RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 IL1RNP18510 177 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 FDXRP22570 491 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 BCL6P41182 706 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 CENPEQ02224 2701 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 ELOAQ14241 798 aaKnown RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 HP1BP3Q5SSJ5 553 aaPredicted RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 TEDDM1Q5T9Z0 273 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 TMEM214Q6NUQ4 689 aaKnown RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 LCTLQ6UWM7 567 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 GALNT7Q86SF2 657 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 PALM2Q8IXS6 379 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 GABPB2Q8TAK5 448 aaPredicted RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 FAR1Q8WVX9 515 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 ALKBH8Q96BT7 664 aaKnown RBP17.34■□□□□ 0.37
USB1-213ENST00000566292 TM4SF19Q96DZ7 209 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 THAP11Q96EK4 314 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 IMMP1LQ96LU5 166 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 VN1R1Q9GZP7 353 aa17.34■□□□□ 0.37
USB1-213ENST00000566292 CROCCQ5TZA2 2017 aa17.33■□□□□ 0.37
USB1-213ENST00000566292 CLDN1O95832 211 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 ITGAMP11215 1152 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 CDH1P12830 882 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 NPPBP16860 134 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 TCP1P17987 556 aaKnown RBP17.33■□□□□ 0.36
USB1-213ENST00000566292 ELK3P41970 407 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 ARG2P78540 354 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 RPUSD3Q6P087 351 aaKnown RBP17.33■□□□□ 0.36
USB1-213ENST00000566292 TRMT10BQ6PF06 316 aaKnown RBP17.33■□□□□ 0.36
USB1-213ENST00000566292 RIPOR1Q6ZS17 1223 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 LANCL3Q6ZV70 420 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 SLC26A11Q86WA9 606 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 KCT2Q8NC54 265 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 OR1N1Q8NGS0 311 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 CFAP36Q96G28 342 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 C5orf34Q96MH7 638 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 OLFM1Q99784 485 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 GRPEL1Q9HAV7 217 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 HCN3Q9P1Z3 774 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 CHMP2BQ9UQN3 213 aa17.33■□□□□ 0.36
USB1-213ENST00000566292 CACNA1DQ01668 2161 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 USP27XA6NNY8 438 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 SGK494L7N484 410 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 F10P00742 488 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 C8orf89P0DMQ9 161 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 CCND1P24385 295 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 TNFSF10P50591 281 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 PDAP1Q13442 181 aaKnown RBP17.32■□□□□ 0.36
USB1-213ENST00000566292 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 HECTD2Q5U5R9 776 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 ASPGQ86U10 573 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 PDSS2Q86YH6 399 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 GPATCH11Q8N954 259 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 CAMKVQ8NCB2 501 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 OR51Q1Q8NH59 317 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 ZCCHC10Q8TBK6 192 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 HAS2Q92819 552 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 PYCR2Q96C36 320 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 PPANQ9NQ55 473 aaKnown RBP17.32■□□□□ 0.36
USB1-213ENST00000566292 TEX264Q9Y6I9 313 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 NOTCH2Q04721 2471 aa17.32■□□□□ 0.36
USB1-213ENST00000566292 IGHV3-20A0A0C4DH32 117 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 DYTNA2CJ06 578 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 OR2W5A6NFC9 320 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 WFS1O76024 890 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 HIST1H2AGP0C0S8 130 aaPredicted RBP17.31■□□□□ 0.36
USB1-213ENST00000566292 EDN3P14138 238 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 HIST1H2ADP20671 130 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 XCR1P46094 333 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 IL2P60568 153 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms