RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 NIPAL1Q6NVV3 410 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 AGTRAPQ6RW13 159 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 FAM180AQ6UWF9 173 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 LCTLQ6UWM7 567 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 LINC00696Q6ZRV3 163 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 MAMDC2Q7Z304 686 aaPredicted RBP14.22□□□□□ -0.13
SPG7-210ENST00000564409 ZC3H7AQ8IWR0 971 aaKnown RBP14.22□□□□□ -0.13
SPG7-210ENST00000564409 TBC1D19Q8N5T2 526 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 BCORP1Q8N888 145 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 GRHL3Q8TE85 626 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 ATL1Q8WXF7 558 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 PSMF1Q92530 271 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 TM4SF19Q96DZ7 209 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 CERS2Q96G23 380 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 SYNPO2LQ9H987 977 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 ABCF3Q9NUQ8 709 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 C19orf25Q9UFG5 118 aaPredicted RBP14.22□□□□□ -0.13
SPG7-210ENST00000564409 ERRFI1Q9UJM3 462 aaPredicted RBP14.22□□□□□ -0.13
SPG7-210ENST00000564409 MRPS2Q9Y399 296 aaKnown RBP14.22□□□□□ -0.13
SPG7-210ENST00000564409 CSAG2Q9Y5P2 127 aa14.22□□□□□ -0.13
SPG7-210ENST00000564409 ENO2P09104 434 aaPredicted RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 C8orf89P0DMQ9 161 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 GABRB3P28472 473 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 AGTR2P50052 363 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 PER3P56645 1201 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 CSNK1G2P78368 415 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 TIAL1Q01085 375 aaKnown RBP eCLIP14.21□□□□□ -0.13
SPG7-210ENST00000564409 DHX9Q08211 1270 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 ILF2Q12905 390 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 FRG1Q14331 258 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 DUPD1Q68J44 220 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 CAPN13Q6MZZ7 669 aaPredicted RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 TMEM214Q6NUQ4 689 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 PAQR3Q6TCH7 311 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 VN1R4Q7Z5H5 301 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 PLD3Q8IV08 490 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 ABHD11Q8NFV4 315 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 PDLIM5Q96HC4 596 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 NDNQ99608 321 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 SARGQ9BW04 601 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 DDX47Q9H0S4 455 aaKnown RBP14.21□□□□□ -0.13
SPG7-210ENST00000564409 ANKHQ9HCJ1 492 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 ADAMTS6Q9UKP5 1117 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 SLC22A7Q9Y694 548 aa14.21□□□□□ -0.13
SPG7-210ENST00000564409 F7P08709 466 aaPredicted RBP14.2□□□□□ -0.14
SPG7-210ENST00000564409 SLC35G6P0C7Q6 338 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 NPPBP16860 134 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 IVDP26440 423 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 BCL6P41182 706 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 TNFSF10P50591 281 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 CDKN2DP55273 166 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 EEF1A2Q05639 463 aaKnown RBP14.2□□□□□ -0.14
SPG7-210ENST00000564409 NAE1Q13564 534 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 PCOLCEQ15113 449 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 BBS9Q3SYG4 887 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 TEDDM1Q5T9Z0 273 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 FAM45BPQ6NSW5 357 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 OR1N1Q8NGS0 311 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 OR9A4Q8NGU2 314 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 FAM45AQ8TCE6 357 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 BRIX1Q8TDN6 353 aaKnown RBP14.2□□□□□ -0.14
SPG7-210ENST00000564409 ANKRD7Q92527 254 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 LINGO1Q96FE5 620 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 IMMP1LQ96LU5 166 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 CYTH2Q99418 400 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 SLX1AQ9BQ83 275 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 MESP1Q9BRJ9 268 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 VN1R1Q9GZP7 353 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 ARL15Q9NXU5 204 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 PTGFRNQ9P2B2 879 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 VWA7Q9Y334 891 aa14.2□□□□□ -0.14
SPG7-210ENST00000564409 NDC80O14777 642 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 UQCRHP07919 91 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 CCR8P51685 355 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 PWP1Q13610 501 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 HERC3Q15034 1050 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 MSS51Q4VC12 460 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 ABHD17BQ5VST6 288 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 STEAP4Q687X5 459 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 PLAG1Q6DJT9 500 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 FAAH2Q6GMR7 532 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 CPEB2Q7Z5Q1 589 aaKnown RBP14.19□□□□□ -0.14
SPG7-210ENST00000564409 ASPGQ86U10 573 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 MFSD9Q8NBP5 474 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 OR4K1Q8NGD4 311 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 OR56A3Q8NH54 315 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 OR51Q1Q8NH59 317 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 SUN3Q8TAQ9 357 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 SLC13A3Q8WWT9 602 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 OR1F2PQ96R84 312 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 ATG10Q9H0Y0 220 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 CLK4Q9HAZ1 481 aaKnown RBP14.19□□□□□ -0.14
SPG7-210ENST00000564409 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
SPG7-210ENST00000564409 OLAHQ9NV23 265 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 NBPF19A0A087WUL8 3843 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 CACNA1DQ01668 2161 aa14.19□□□□□ -0.14
SPG7-210ENST00000564409 TRBC2A0A5B9 178 aa14.18□□□□□ -0.14
SPG7-210ENST00000564409 CCDC188H7C350 402 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms