RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	GKN3P	P0CG01	181 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PFKP	Q01813	784 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	DUOXA1	Q1HG43	343 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PLK5	Q496M5	336 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.14	□□□□□ -1.75	2e-8	■□□□□ 8.4
MACF1-231	ENST00000564288	DPPA2	Q7Z7J5	298 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CIR1	Q86X95	450 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	RDH10	Q8IZV5	341 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC7A13	Q8TCU3	470 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	RTP4	Q96DX8	246 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PSORS1C1	Q9UIG5	152 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	METTL15	A6NJ78	407 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CXCR2	P25025	360 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	GABRB3	P28472	473 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	RAB13	P51153	203 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	POU4F3	Q15319	338 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TAZ	Q16635	292 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	LINC00518	Q8N0U6	118 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	C3orf58	Q8NDZ4	430 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CSPG4P5	Q96PW8	444 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM175	Q9BSA9	504 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	POPDC2	Q9HBU9	364 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ISYNA1	Q9NPH2	558 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	NLGN3	Q9NZ94	848 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CRAT	P43155	626 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SCNN1G	P51170	649 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	STEAP4	Q687X5	459 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF772	Q68DY9	489 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	BEST4	Q8NFU0	473 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	C12orf57	Q99622	126 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	DOHH	Q9BU89	302 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	COL1A2	P08123	1366 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CD1E	P15812	388 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CDHR5	Q9HBB8	845 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	OPTC	Q9UBM4	332 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	NOD1	Q9Y239	953 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CLIC1	O00299	241 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	DPM1	O60762	260 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	HOXD8	P13378	290 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CALCR	P30988	508 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	HAAO	P46952	286 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MFSD10	Q14728	455 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM198	Q66K66	360 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TMPRSS11B	Q86T26	416 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	EID2	Q8N6I1	236 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	GPR22	Q99680	433 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	BTBD2	Q9BX70	525 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	KCNH6	Q9H252	994 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM185B	Q9H7F4	350 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ABCB9	Q9NP78	766 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SARS2	Q9NP81	518 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	RUVBL1	Q9Y265	456 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MYH8	P13535	1937 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SGCE	O43556	437 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	GTF2F2	P13984	249 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CPB1	P15086	417 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	MEOX2	P50222	304 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	DSG2	Q14126	1118 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	PAPD4	Q6PIY7	484 aa	Known RBP	4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CYP2W1	Q8TAV3	490 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	FCRL5	Q96RD9	977 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	TOLLIP	Q9H0E2	274 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	REV1	Q9UBZ9	1251 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	NENF	Q9UMX5	172 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	KAT6A	Q92794	2004 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CEP250	Q9BV73	2442 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	ALDH4A1	P30038	563 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CDH5	P33151	784 aa	Predicted RBP	4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	C1orf216	Q8TAB5	229 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	DDX1	Q92499	740 aa	Known RBP	4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CPB2	Q96IY4	423 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	TSGA13	Q96PP4	275 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CSAD	Q9Y600	493 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	PRAMEF22	A3QJZ6	481 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	GPX3	P22352	226 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	GRK4	P32298	578 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	LAPTM5	Q13571	262 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	SEC23B	Q15437	767 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	MSS51	Q4VC12	460 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	IGSF11	Q5DX21	431 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	MFSD6L	Q8IWD5	586 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	OR5T3	Q8NGG3	340 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	GLOD4	Q9HC38	313 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	AGAP14	A8MT82	685 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	LYRM1	O43325	122 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	KERA	O60938	352 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	EED	O75530	441 aa	Known RBP	4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	PPM1B	O75688	479 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	CLDN9	O95484	217 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	RNH1	P13489	461 aa	Known RBP	4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	POU2F1	P14859	743 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	APLP1	P51693	650 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF691	Q5VV52	312 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	C14orf80	Q86SX3	495 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXL20	Q96IG2	436 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	OSBPL2	Q9H1P3	480 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	MYH15	Q9Y2K3	1946 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	ANKRD28	O15084	1053 aa		4.13	□□□□□ -1.75
MACF1-231	ENST00000564288	AR	P10275	920 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms